Protein–RNA interactions for Protein: P56945

BCAR1, Breast cancer anti-estrogen resistance protein 1, humanhuman

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR1P56945 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.19■□□□□ 0.5
BCAR1P56945 AC069335.1-201ENST00000489972 472 ntBASIC18.19■□□□□ 0.5
BCAR1P56945 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.19■□□□□ 0.5
BCAR1P56945 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
BCAR1P56945 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BCAR1P56945 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BCAR1P56945 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.19■□□□□ 0.5
BCAR1P56945 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BCAR1P56945 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.19■□□□□ 0.5
BCAR1P56945 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.19■□□□□ 0.5
BCAR1P56945 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.19■□□□□ 0.5
BCAR1P56945 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.19■□□□□ 0.5
BCAR1P56945 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.19■□□□□ 0.5
BCAR1P56945 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
BCAR1P56945 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BCAR1P56945 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BCAR1P56945 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.19■□□□□ 0.5
BCAR1P56945 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BCAR1P56945 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
BCAR1P56945 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.19■□□□□ 0.5
BCAR1P56945 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.19■□□□□ 0.5
BCAR1P56945 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BCAR1P56945 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BCAR1P56945 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
BCAR1P56945 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.18■□□□□ 0.5
BCAR1P56945 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
BCAR1P56945 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.18■□□□□ 0.5
BCAR1P56945 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.18■□□□□ 0.5
BCAR1P56945 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BCAR1P56945 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BCAR1P56945 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.18■□□□□ 0.5
BCAR1P56945 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BCAR1P56945 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.18■□□□□ 0.5
BCAR1P56945 AC067863.1-201ENST00000494933 530 ntBASIC18.18■□□□□ 0.5
BCAR1P56945 DUX4L27-201ENST00000554796 1261 ntBASIC18.18■□□□□ 0.5
BCAR1P56945 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.18■□□□□ 0.5
BCAR1P56945 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.18■□□□□ 0.5
BCAR1P56945 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.18■□□□□ 0.5
BCAR1P56945 AL009183.1-201ENST00000603760 355 ntBASIC18.18■□□□□ 0.5
BCAR1P56945 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.18■□□□□ 0.5
BCAR1P56945 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.18■□□□□ 0.5
BCAR1P56945 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.18■□□□□ 0.5
BCAR1P56945 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
BCAR1P56945 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BCAR1P56945 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BCAR1P56945 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BCAR1P56945 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BCAR1P56945 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
BCAR1P56945 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
BCAR1P56945 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.18■□□□□ 0.5
BCAR1P56945 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
BCAR1P56945 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.18■□□□□ 0.5
BCAR1P56945 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.18■□□□□ 0.5
BCAR1P56945 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BCAR1P56945 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BCAR1P56945 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BCAR1P56945 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BCAR1P56945 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BCAR1P56945 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BCAR1P56945 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BCAR1P56945 AL035633.1-201ENST00000406139 838 ntBASIC18.17■□□□□ 0.5
BCAR1P56945 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BCAR1P56945 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.17■□□□□ 0.5
BCAR1P56945 SPCS2P4-201ENST00000436160 681 ntBASIC18.17■□□□□ 0.5
BCAR1P56945 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.17■□□□□ 0.5
BCAR1P56945 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.17■□□□□ 0.5
BCAR1P56945 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.17■□□□□ 0.5
BCAR1P56945 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.17■□□□□ 0.5
BCAR1P56945 AL390955.2-201ENST00000603032 514 ntBASIC18.17■□□□□ 0.5
BCAR1P56945 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BCAR1P56945 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BCAR1P56945 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
BCAR1P56945 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BCAR1P56945 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.17■□□□□ 0.5
BCAR1P56945 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
BCAR1P56945 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
BCAR1P56945 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BCAR1P56945 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.17■□□□□ 0.5
BCAR1P56945 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BCAR1P56945 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BCAR1P56945 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BCAR1P56945 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
BCAR1P56945 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BCAR1P56945 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.16■□□□□ 0.5
BCAR1P56945 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
BCAR1P56945 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BCAR1P56945 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
BCAR1P56945 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BCAR1P56945 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BCAR1P56945 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.16■□□□□ 0.5
BCAR1P56945 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BCAR1P56945 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BCAR1P56945 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.16■□□□□ 0.5
BCAR1P56945 AL353732.1-201ENST00000569618 1459 ntBASIC18.16■□□□□ 0.5
BCAR1P56945 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.16■□□□□ 0.5
BCAR1P56945 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BCAR1P56945 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.16■□□□□ 0.5
BCAR1P56945 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BCAR1P56945 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BCAR1P56945 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms