Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.63■□□□□ 0.25
CDKN2DP55273 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.63■□□□□ 0.25
CDKN2DP55273 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 AL512652.2-201ENST00000625156 1716 ntBASIC16.63■□□□□ 0.25
CDKN2DP55273 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.63■□□□□ 0.25
CDKN2DP55273 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.63■□□□□ 0.25
CDKN2DP55273 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.63■□□□□ 0.25
CDKN2DP55273 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.63■□□□□ 0.25
CDKN2DP55273 AC079781.3-201ENST00000449110 356 ntBASIC16.63■□□□□ 0.25
CDKN2DP55273 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.63■□□□□ 0.25
CDKN2DP55273 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.63■□□□□ 0.25
CDKN2DP55273 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.63■□□□□ 0.25
CDKN2DP55273 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.63■□□□□ 0.25
CDKN2DP55273 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.63■□□□□ 0.25
CDKN2DP55273 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDKN2DP55273 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.63■□□□□ 0.25
CDKN2DP55273 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.63■□□□□ 0.25
CDKN2DP55273 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2DP55273 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CDKN2DP55273 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.62■□□□□ 0.25
CDKN2DP55273 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.62■□□□□ 0.25
CDKN2DP55273 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 ME2P1-201ENST00000426028 1970 ntBASIC16.62■□□□□ 0.25
CDKN2DP55273 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDKN2DP55273 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKN2DP55273 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKN2DP55273 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDKN2DP55273 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.62■□□□□ 0.25
CDKN2DP55273 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKN2DP55273 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CDKN2DP55273 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
CDKN2DP55273 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.62■□□□□ 0.25
CDKN2DP55273 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.62■□□□□ 0.25
CDKN2DP55273 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CDKN2DP55273 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.62■□□□□ 0.25
CDKN2DP55273 AC008667.4-201ENST00000607370 168 ntBASIC16.62■□□□□ 0.25
CDKN2DP55273 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKN2DP55273 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKN2DP55273 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKN2DP55273 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.62■□□□□ 0.25
CDKN2DP55273 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDKN2DP55273 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CDKN2DP55273 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CDKN2DP55273 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.62■□□□□ 0.25
CDKN2DP55273 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CDKN2DP55273 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2DP55273 AC131009.4-201ENST00000624048 1740 ntBASIC16.62■□□□□ 0.25
CDKN2DP55273 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2DP55273 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2DP55273 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CDKN2DP55273 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDKN2DP55273 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2DP55273 CYP2T1P-202ENST00000641596 2535 ntBASIC16.61■□□□□ 0.25
CDKN2DP55273 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2DP55273 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKN2DP55273 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDKN2DP55273 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2DP55273 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CDKN2DP55273 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2DP55273 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2DP55273 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CDKN2DP55273 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2DP55273 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2DP55273 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.61■□□□□ 0.25
CDKN2DP55273 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKN2DP55273 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKN2DP55273 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.61■□□□□ 0.25
CDKN2DP55273 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKN2DP55273 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.61■□□□□ 0.25
CDKN2DP55273 AC105339.3-201ENST00000560043 636 ntBASIC16.61■□□□□ 0.25
CDKN2DP55273 AC091167.2-201ENST00000579581 588 ntBASIC16.61■□□□□ 0.25
CDKN2DP55273 AL356488.2-201ENST00000602755 427 ntBASIC16.61■□□□□ 0.25
CDKN2DP55273 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.61■□□□□ 0.25
CDKN2DP55273 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms