Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CBX6O95503 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CBX6O95503 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CBX6O95503 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CBX6O95503 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CBX6O95503 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CBX6O95503 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.87■□□□□ 0.29
CBX6O95503 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CBX6O95503 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX6O95503 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.86■□□□□ 0.29
CBX6O95503 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX6O95503 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CBX6O95503 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CBX6O95503 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CBX6O95503 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX6O95503 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CBX6O95503 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CBX6O95503 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX6O95503 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX6O95503 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.86■□□□□ 0.29
CBX6O95503 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.86■□□□□ 0.29
CBX6O95503 TOB2P1-201ENST00000469761 992 ntBASIC16.86■□□□□ 0.29
CBX6O95503 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX6O95503 AC124947.2-201ENST00000547118 1133 ntBASIC16.86■□□□□ 0.29
CBX6O95503 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.86■□□□□ 0.29
CBX6O95503 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.86■□□□□ 0.29
CBX6O95503 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CBX6O95503 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.86■□□□□ 0.29
CBX6O95503 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CBX6O95503 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CBX6O95503 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.86■□□□□ 0.29
CBX6O95503 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.86■□□□□ 0.29
CBX6O95503 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CBX6O95503 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.86■□□□□ 0.29
CBX6O95503 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CBX6O95503 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX6O95503 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.86■□□□□ 0.29
CBX6O95503 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.86■□□□□ 0.29
CBX6O95503 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX6O95503 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX6O95503 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.86■□□□□ 0.29
CBX6O95503 HLA-A-202ENST00000376806 1854 ntBASIC16.86■□□□□ 0.29
CBX6O95503 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CBX6O95503 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CBX6O95503 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX6O95503 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.86■□□□□ 0.29
CBX6O95503 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CBX6O95503 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.86■□□□□ 0.29
CBX6O95503 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.86■□□□□ 0.29
CBX6O95503 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.85■□□□□ 0.29
CBX6O95503 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CBX6O95503 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
CBX6O95503 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.85■□□□□ 0.29
CBX6O95503 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CBX6O95503 KRT18P65-201ENST00000439811 1286 ntBASIC16.85■□□□□ 0.29
CBX6O95503 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.85■□□□□ 0.29
CBX6O95503 AC079776.4-201ENST00000511039 504 ntBASIC16.85■□□□□ 0.29
CBX6O95503 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.85■□□□□ 0.29
CBX6O95503 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.85■□□□□ 0.29
CBX6O95503 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.85■□□□□ 0.29
CBX6O95503 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CBX6O95503 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.85■□□□□ 0.29
CBX6O95503 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.85■□□□□ 0.29
CBX6O95503 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.85■□□□□ 0.29
CBX6O95503 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CBX6O95503 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX6O95503 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CBX6O95503 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CBX6O95503 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CBX6O95503 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.84■□□□□ 0.29
CBX6O95503 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CBX6O95503 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.84■□□□□ 0.29
CBX6O95503 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms