Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 TOP3BP1-201ENST00000420768 1380 ntBASIC13.54□□□□□ -0.24
UPK2O00526 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.54□□□□□ -0.24
UPK2O00526 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.54□□□□□ -0.24
UPK2O00526 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.54□□□□□ -0.24
UPK2O00526 AL513523.2-202ENST00000427283 2040 ntBASIC13.54□□□□□ -0.24
UPK2O00526 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.54□□□□□ -0.24
UPK2O00526 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.54□□□□□ -0.24
UPK2O00526 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.54□□□□□ -0.24
UPK2O00526 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK2O00526 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.54□□□□□ -0.24
UPK2O00526 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.53□□□□□ -0.24
UPK2O00526 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK2O00526 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
UPK2O00526 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
UPK2O00526 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK2O00526 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.53□□□□□ -0.24
UPK2O00526 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.53□□□□□ -0.24
UPK2O00526 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.53□□□□□ -0.24
UPK2O00526 MTDHP3-201ENST00000594186 672 ntBASIC13.53□□□□□ -0.24
UPK2O00526 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.53□□□□□ -0.24
UPK2O00526 AL732292.2-201ENST00000609649 430 ntBASIC13.53□□□□□ -0.24
UPK2O00526 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.53□□□□□ -0.24
UPK2O00526 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.53□□□□□ -0.24
UPK2O00526 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.53□□□□□ -0.24
UPK2O00526 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK2O00526 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
UPK2O00526 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
UPK2O00526 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK2O00526 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
UPK2O00526 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
UPK2O00526 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK2O00526 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UPK2O00526 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.52□□□□□ -0.24
UPK2O00526 ME2P1-201ENST00000426028 1970 ntBASIC13.52□□□□□ -0.24
UPK2O00526 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.52□□□□□ -0.24
UPK2O00526 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.52□□□□□ -0.24
UPK2O00526 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UPK2O00526 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UPK2O00526 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.52□□□□□ -0.24
UPK2O00526 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.52□□□□□ -0.24
UPK2O00526 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UPK2O00526 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UPK2O00526 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
UPK2O00526 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
UPK2O00526 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
UPK2O00526 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
UPK2O00526 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK2O00526 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK2O00526 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.52□□□□□ -0.25
UPK2O00526 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UPK2O00526 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.52□□□□□ -0.25
UPK2O00526 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.52□□□□□ -0.25
UPK2O00526 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.52□□□□□ -0.25
UPK2O00526 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.52□□□□□ -0.25
UPK2O00526 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.52□□□□□ -0.25
UPK2O00526 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.52□□□□□ -0.25
UPK2O00526 AC139887.3-201ENST00000568585 713 ntBASIC13.52□□□□□ -0.25
UPK2O00526 AL445228.2-201ENST00000605589 952 ntBASIC13.52□□□□□ -0.25
UPK2O00526 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.52□□□□□ -0.25
UPK2O00526 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.52□□□□□ -0.25
UPK2O00526 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UPK2O00526 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK2O00526 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK2O00526 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK2O00526 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK2O00526 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.52□□□□□ -0.25
UPK2O00526 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK2O00526 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK2O00526 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK2O00526 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.52□□□□□ -0.25
UPK2O00526 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.52□□□□□ -0.25
UPK2O00526 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK2O00526 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.52□□□□□ -0.25
UPK2O00526 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK2O00526 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms