Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC24.66■■□□□ 1.54
HFM1A2PYH4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC24.66■■□□□ 1.54
HFM1A2PYH4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HFM1A2PYH4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
HFM1A2PYH4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
HFM1A2PYH4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HFM1A2PYH4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
HFM1A2PYH4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC24.66■■□□□ 1.54
HFM1A2PYH4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC24.66■■□□□ 1.54
HFM1A2PYH4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC24.66■■□□□ 1.54
HFM1A2PYH4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HFM1A2PYH4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
HFM1A2PYH4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HFM1A2PYH4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC24.65■■□□□ 1.54
HFM1A2PYH4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
HFM1A2PYH4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC24.65■■□□□ 1.54
HFM1A2PYH4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC24.65■■□□□ 1.54
HFM1A2PYH4 CNN2P2-201ENST00000443536 909 ntBASIC24.65■■□□□ 1.54
HFM1A2PYH4 CNN2P3-201ENST00000450201 906 ntBASIC24.65■■□□□ 1.54
HFM1A2PYH4 AC069262.1-201ENST00000539058 672 ntBASIC24.65■■□□□ 1.54
HFM1A2PYH4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC24.65■■□□□ 1.54
HFM1A2PYH4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
HFM1A2PYH4 AL136317.3-201ENST00000618497 906 ntBASIC24.65■■□□□ 1.54
HFM1A2PYH4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC24.65■■□□□ 1.54
HFM1A2PYH4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC24.65■■□□□ 1.54
HFM1A2PYH4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC24.65■■□□□ 1.54
HFM1A2PYH4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 GOLGA2P9-201ENST00000596977 1937 ntBASIC24.65■■□□□ 1.54
HFM1A2PYH4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
HFM1A2PYH4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC24.65■■□□□ 1.54
HFM1A2PYH4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
HFM1A2PYH4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
HFM1A2PYH4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
HFM1A2PYH4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
HFM1A2PYH4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
HFM1A2PYH4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC24.64■■□□□ 1.54
HFM1A2PYH4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC24.64■■□□□ 1.54
HFM1A2PYH4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
HFM1A2PYH4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
HFM1A2PYH4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
HFM1A2PYH4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
HFM1A2PYH4 AGGF1P2-201ENST00000426656 2106 ntBASIC24.64■■□□□ 1.53
HFM1A2PYH4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
HFM1A2PYH4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
HFM1A2PYH4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
HFM1A2PYH4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC24.63■■□□□ 1.53
HFM1A2PYH4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC24.63■■□□□ 1.53
HFM1A2PYH4 WRB-204ENST00000398753 699 ntTSL 3 BASIC24.63■■□□□ 1.53
HFM1A2PYH4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC24.63■■□□□ 1.53
HFM1A2PYH4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC24.63■■□□□ 1.53
HFM1A2PYH4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC24.63■■□□□ 1.53
HFM1A2PYH4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 RARRES2P9-201ENST00000565168 469 ntBASIC24.63■■□□□ 1.53
HFM1A2PYH4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC24.63■■□□□ 1.53
HFM1A2PYH4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC24.63■■□□□ 1.53
HFM1A2PYH4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC24.63■■□□□ 1.53
HFM1A2PYH4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
HFM1A2PYH4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC24.63■■□□□ 1.53
HFM1A2PYH4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 AC106886.4-201ENST00000623557 2502 ntBASIC24.63■■□□□ 1.53
HFM1A2PYH4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
HFM1A2PYH4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC24.62■■□□□ 1.53
HFM1A2PYH4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
HFM1A2PYH4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC24.62■■□□□ 1.53
HFM1A2PYH4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC24.62■■□□□ 1.53
HFM1A2PYH4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
HFM1A2PYH4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC24.62■■□□□ 1.53
HFM1A2PYH4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC24.62■■□□□ 1.53
HFM1A2PYH4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
HFM1A2PYH4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
HFM1A2PYH4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
HFM1A2PYH4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms