Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 NAPSB-206ENST00000562112 1266 ntBASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 AC010460.3-201ENST00000511359 1579 ntBASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 FRMD8P1-201ENST00000440433 1524 ntBASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 ECEL1P3-201ENST00000427961 737 ntBASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 AC103564.2-201ENST00000432853 1299 ntBASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 RASA4DP-201ENST00000460726 1199 ntBASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 AP003733.1-201ENST00000491725 852 ntBASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 GCSHP2-201ENST00000560971 527 ntBASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 AL365203.3-201ENST00000609742 2057 ntBASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.17□□□□□ -0.14
KCNIP3Q9Y2W7 KRT17P2-201ENST00000300992 1314 ntBASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.16□□□□□ -0.14
KCNIP3Q9Y2W7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms