Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 RPLP0-208ENST00000547191 680 ntTSL 515.76■□□□□ 0.112e-10■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-210ENST00000547475 792 ntTSL 315.76■□□□□ 0.112e-10■□□□□ 8.2
DROSHAQ9NRR4 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.091e-15■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-213ENST00000548568 1127 ntTSL 1 (best)15.6■□□□□ 0.092e-10■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-221ENST00000551258 966 ntTSL 515.59■□□□□ 0.092e-10■□□□□ 8.2
DROSHAQ9NRR4 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.053e-7■□□□□ 8.2
DROSHAQ9NRR4 ZNHIT1-202ENST00000461205 571 ntTSL 315.04■□□□□ -03e-7■□□□□ 8.2
DROSHAQ9NRR4 CAPZA2-211ENST00000484325 324 ntTSL 1 (best)15□□□□□ -0.013e-8■□□□□ 8.2
DROSHAQ9NRR4 RPL27-201ENST00000253788 490 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.012e-10■□□□□ 8.2
DROSHAQ9NRR4 SSBP3-215ENST00000533946 431 ntTSL 314.95□□□□□ -0.024e-6■□□□□ 8.2
DROSHAQ9NRR4 CR1L-203ENST00000508064 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.024e-6■□□□□ 8.2
DROSHAQ9NRR4 CD46P1-201ENST00000441364 763 ntBASIC14.9□□□□□ -0.024e-6■□□□□ 8.2
DROSHAQ9NRR4 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.044e-6■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-211ENST00000548495 651 ntTSL 314.73□□□□□ -0.052e-10■□□□□ 8.2
DROSHAQ9NRR4 CAPZA2-201ENST00000361183 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.073e-8■□□□□ 8.2
DROSHAQ9NRR4 HIST1H2BC-201ENST00000314332 659 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.084e-6■□□□□ 8.2
DROSHAQ9NRR4 ZNF644-202ENST00000347275 2036 ntTSL 1 (best) BASIC14.47□□□□□ -0.094e-6■□□□□ 8.2
DROSHAQ9NRR4 GTPBP4-205ENST00000491635 2220 ntTSL 214.36□□□□□ -0.113e-8■□□□□ 8.2
DROSHAQ9NRR4 ATP11A-217ENST00000614170 3542 nt14.33□□□□□ -0.121e-16■□□□□ 8.2
DROSHAQ9NRR4 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC14.05□□□□□ -0.161e-15■□□□□ 8.2
DROSHAQ9NRR4 RPL27-202ENST00000586277 460 ntTSL 313.13□□□□□ -0.312e-10■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-207ENST00000547173 864 ntTSL 312.98□□□□□ -0.332e-10■□□□□ 8.2
DROSHAQ9NRR4 CR1L-205ENST00000531844 663 ntTSL 212.68□□□□□ -0.384e-6■□□□□ 8.2
DROSHAQ9NRR4 ATP11A-210ENST00000471555 5786 ntTSL 1 (best)12.64□□□□□ -0.391e-16■□□□□ 8.2
DROSHAQ9NRR4 CENPE-203ENST00000503705 3468 ntTSL 212.63□□□□□ -0.394e-6■□□□□ 8.2
DROSHAQ9NRR4 ZFAS1-209ENST00000620594 508 ntTSL 312.15□□□□□ -0.462e-6■□□□□ 8.2
DROSHAQ9NRR4 RPL27-204ENST00000588830 318 ntTSL 212.1□□□□□ -0.472e-10■□□□□ 8.2
DROSHAQ9NRR4 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.482e-10■□□□□ 8.2
DROSHAQ9NRR4 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.523e-7■□□□□ 8.2
DROSHAQ9NRR4 ZFAS1-201ENST00000326677 504 ntTSL 1 (best)11.79□□□□□ -0.522e-6■□□□□ 8.2
DROSHAQ9NRR4 ZFAS1-204ENST00000428008 566 ntTSL 211.79□□□□□ -0.522e-6■□□□□ 8.2
DROSHAQ9NRR4 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.554e-6■□□□□ 8.2
DROSHAQ9NRR4 CAPZA2-206ENST00000461878 621 ntTSL 1 (best)11.25□□□□□ -0.613e-8■□□□□ 8.2
DROSHAQ9NRR4 ZNHIT1-204ENST00000492315 3958 ntTSL 210.51□□□□□ -0.733e-7■□□□□ 8.2
DROSHAQ9NRR4 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.894e-6■□□□□ 8.2
DROSHAQ9NRR4 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.114e-6■□□□□ 8.2
DROSHAQ9NRR4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC7.99□□□□□ -1.134e-6■□□□□ 8.2
DROSHAQ9NRR4 TAF15-201ENST00000603067 580 ntTSL 57.34□□□□□ -1.234e-6■□□□□ 8.2
DROSHAQ9NRR4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.284e-6■□□□□ 8.2
DROSHAQ9NRR4 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.73□□□□□ -1.333e-8■□□□□ 8.2
DROSHAQ9NRR4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC6.08□□□□□ -1.444e-6■□□□□ 8.2
DROSHAQ9NRR4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.76□□□□□ -1.494e-6■□□□□ 8.2
DROSHAQ9NRR4 RPL23A-207ENST00000578181 593 ntTSL 25.09□□□□□ -1.594e-6■□□□□ 8.2
DROSHAQ9NRR4 ARIH1-209ENST00000567762 319 ntTSL 35.05□□□□□ -1.64e-6■□□□□ 8.2
DROSHAQ9NRR4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.53□□□□□ -1.683e-8■□□□□ 8.2
DROSHAQ9NRR4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.74e-6■□□□□ 8.2
DROSHAQ9NRR4 CAPZA2-203ENST00000417431 517 ntTSL 34.33□□□□□ -1.723e-8■□□□□ 8.2
DROSHAQ9NRR4 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.04□□□□□ -1.763e-8■□□□□ 8.2
DROSHAQ9NRR4 CAPZA2-207ENST00000464223 164 ntTSL 1 (best)3.24□□□□□ -1.893e-8■□□□□ 8.2
DROSHAQ9NRR4 CAPZA2-205ENST00000449080 814 ntTSL 52.9□□□□□ -1.943e-8■□□□□ 8.2
DROSHAQ9NRR4 CAPZA2-204ENST00000426421 1214 ntTSL 52.81□□□□□ -1.963e-8■□□□□ 8.2
DROSHAQ9NRR4 CAPZA2-210ENST00000466023 626 ntTSL 32.27□□□□□ -2.053e-8■□□□□ 8.2
DROSHAQ9NRR4 CAPZA2-208ENST00000464669 898 ntTSL 21.87□□□□□ -2.113e-8■□□□□ 8.2
DROSHAQ9NRR4 SNORD42A-201ENST00000459584 64 ntBASIC1.33□□□□□ -2.24e-6■□□□□ 8.2
DROSHAQ9NRR4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC21.1■□□□□ 0.974e-6■□□□□ 8.2
DROSHAQ9NRR4 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.424e-6■□□□□ 8.2
DROSHAQ9NRR4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC32.7■■■□□ 2.834e-15■□□□□ 8.2
DROSHAQ9NRR4 FNDC3B-207ENST00000469491 2916 ntTSL 225.04■■□□□ 1.64e-15■□□□□ 8.2
DROSHAQ9NRR4 FNDC3B-202ENST00000415807 5083 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.124e-15■□□□□ 8.2
DROSHAQ9NRR4 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC13.6□□□□□ -0.234e-15■□□□□ 8.2
DROSHAQ9NRR4 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.44e-15■□□□□ 8.2
DROSHAQ9NRR4 PDXK-204ENST00000398078 1069 ntTSL 225.68■■□□□ 1.75e-8■□□□□ 8.2
DROSHAQ9NRR4 PDXK-217ENST00000490666 577 ntTSL 523.07■■□□□ 1.285e-8■□□□□ 8.2
DROSHAQ9NRR4 PDXK-203ENST00000343528 1101 ntTSL 1 (best)21.84■■□□□ 1.095e-8■□□□□ 8.2
DROSHAQ9NRR4 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC14.29□□□□□ -0.125e-8■□□□□ 8.2
DROSHAQ9NRR4 GABRE-202ENST00000417300 619 ntTSL 218.04■□□□□ 0.481e-9■□□□□ 8.2
DROSHAQ9NRR4 AC124312.1-202ENST00000557230 669 ntAPPRIS ALT2 TSL 511.08□□□□□ -0.641e-7■□□□□ 8.1
DROSHAQ9NRR4 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC9.88□□□□□ -0.831e-7■□□□□ 8.1
DROSHAQ9NRR4 SORBS1-213ENST00000465489 736 ntTSL 38.96□□□□□ -0.981e-7■□□□□ 8.1
DROSHAQ9NRR4 SNHG14-214ENST00000551361 550 ntTSL 32.87□□□□□ -1.951e-7■□□□□ 8.1
DROSHAQ9NRR4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.85□□□□□ -1.951e-7■□□□□ 8.1
DROSHAQ9NRR4 ZNF316-202ENST00000427912 520 ntTSL 322.38■■□□□ 1.171e-7■□□□□ 8.1
DROSHAQ9NRR4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC29.61■■■□□ 2.334e-7■□□□□ 8.1
DROSHAQ9NRR4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC29.44■■■□□ 2.34e-7■□□□□ 8.1
DROSHAQ9NRR4 TMEM64-206ENST00000521852 587 ntTSL 428.88■■■□□ 2.214e-7■□□□□ 8.1
DROSHAQ9NRR4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.954e-7■□□□□ 8.1
DROSHAQ9NRR4 ARHGEF1-210ENST00000594521 826 ntTSL 527.13■■□□□ 1.934e-7■□□□□ 8.1
DROSHAQ9NRR4 ARHGEF1-218ENST00000599589 2636 ntTSL 1 (best)26.87■■□□□ 1.894e-7■□□□□ 8.1
DROSHAQ9NRR4 ATG4B-216ENST00000475195 762 ntTSL 225.36■■□□□ 1.654e-7■□□□□ 8.1
DROSHAQ9NRR4 ATG4B-203ENST00000400772 625 ntTSL 424.37■■□□□ 1.494e-7■□□□□ 8.1
DROSHAQ9NRR4 ARHGEF1-213ENST00000595897 2973 ntTSL 1 (best)24.35■■□□□ 1.494e-7■□□□□ 8.1
DROSHAQ9NRR4 TMEM64-202ENST00000422900 1174 ntTSL 224.12■■□□□ 1.454e-7■□□□□ 8.1
DROSHAQ9NRR4 ATG4B-222ENST00000491867 435 ntTSL 522.73■■□□□ 1.234e-7■□□□□ 8.1
DROSHAQ9NRR4 ATG4B-214ENST00000465399 581 ntTSL 222.4■■□□□ 1.184e-7■□□□□ 8.1
DROSHAQ9NRR4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC22.39■■□□□ 1.174e-7■□□□□ 8.1
DROSHAQ9NRR4 ATG4B-218ENST00000479554 556 ntTSL 422.24■■□□□ 1.154e-7■□□□□ 8.1
DROSHAQ9NRR4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.14e-7■□□□□ 8.1
DROSHAQ9NRR4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.994e-7■□□□□ 8.1
DROSHAQ9NRR4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC21.09■□□□□ 0.974e-7■□□□□ 8.1
DROSHAQ9NRR4 ATG4B-208ENST00000419606 553 ntTSL 419.56■□□□□ 0.724e-7■□□□□ 8.1
DROSHAQ9NRR4 ATG4B-207ENST00000415107 356 ntTSL 518.44■□□□□ 0.544e-7■□□□□ 8.1
DROSHAQ9NRR4 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.524e-7■□□□□ 8.1
DROSHAQ9NRR4 ARHGEF1-220ENST00000600274 3439 ntTSL 1 (best)16.22■□□□□ 0.194e-7■□□□□ 8.1
DROSHAQ9NRR4 EMD-205ENST00000471965 800 ntTSL 234.42■■■■□ 3.12e-17■□□□□ 8.1
DROSHAQ9NRR4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.132e-17■□□□□ 8.1
DROSHAQ9NRR4 TAF1C-219ENST00000568265 1140 ntAPPRIS ALT2 TSL 430.56■■■□□ 2.486e-6■□□□□ 8.1
DROSHAQ9NRR4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.686e-6■□□□□ 8.1
DROSHAQ9NRR4 TAF1C-208ENST00000563428 2531 ntTSL 224.12■■□□□ 1.456e-6■□□□□ 8.1
DROSHAQ9NRR4 TAF1C-204ENST00000544090 2747 ntTSL 223.05■■□□□ 1.286e-6■□□□□ 8.1
DROSHAQ9NRR4 TAF1C-217ENST00000566903 2628 ntTSL 521.69■■□□□ 1.066e-6■□□□□ 8.1
Retrieved 100 of 16,331 protein–RNA pairs in 185.3 ms