RNA–Protein interactions for RNA: ENST00000611174.4

CENPE-208, Transcript of centromere protein E, humanhuman

TSL 5 BASIC

Gene CENPE, Length 8,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-208ENST00000611174 DCAF8L2P0C7V8 631 aa8.5□□□□□ -1.05
CENPE-208ENST00000611174 SUPT5HO00267 1087 aaKnown RBP8.16□□□□□ -1.1
CENPE-208ENST00000611174 NISCHQ9Y2I1 1504 aa8.1□□□□□ -1.11
CENPE-208ENST00000611174 SHROOM4Q9ULL8 1493 aa8.02□□□□□ -1.13
CENPE-208ENST00000611174 EHMT2Q96KQ7 1210 aa7.9□□□□□ -1.14
CENPE-208ENST00000611174 FAM9AQ8IZU1 332 aaPredicted RBP7.71□□□□□ -1.18
CENPE-208ENST00000611174 PCGF6Q9BYE7 350 aa7.61□□□□□ -1.19
CENPE-208ENST00000611174 TTBK1Q5TCY1 1321 aaPredicted RBP7.6□□□□□ -1.19
CENPE-208ENST00000611174 RANGAP1P46060 587 aaPredicted RBP7.49□□□□□ -1.21
CENPE-208ENST00000611174 TRIM41Q8WV44 630 aa7.45□□□□□ -1.22
CENPE-208ENST00000611174 PPARGC1BQ86YN6 1023 aaKnown RBP7.43□□□□□ -1.22
CENPE-208ENST00000611174 APLP2Q06481 763 aa7.41□□□□□ -1.22
CENPE-208ENST00000611174 LOC105371045A0A1W2PR82 267 aa7.37□□□□□ -1.23
CENPE-208ENST00000611174 UBTFP17480 764 aaKnown RBP7.33□□□□□ -1.24
CENPE-208ENST00000611174 CHIC1Q5VXU3 224 aa7.32□□□□□ -1.24
CENPE-208ENST00000611174 CCER1Q8TC90 406 aaPredicted RBP7.32□□□□□ -1.24
CENPE-208ENST00000611174 ATP1B4Q9UN42 357 aaPredicted RBP7.29□□□□□ -1.24
CENPE-208ENST00000611174 YTHDC1Q96MU7 727 aaKnown RBP7.19□□□□□ -1.26
CENPE-208ENST00000611174 HRCP23327 699 aa7.18□□□□□ -1.26
CENPE-208ENST00000611174 TRIM26Q12899 539 aaPredicted RBP7.17□□□□□ -1.26
CENPE-208ENST00000611174 ITGAEP38570 1179 aa7.16□□□□□ -1.26
CENPE-208ENST00000611174 ZEB1P37275 1124 aaPredicted RBP7.16□□□□□ -1.26
CENPE-208ENST00000611174 HNRNPUL2Q1KMD3 747 aaKnown RBP7.14□□□□□ -1.27
CENPE-208ENST00000611174 CENPBP07199 599 aaPredicted RBP7.13□□□□□ -1.27
CENPE-208ENST00000611174 PELP1Q8IZL8 1130 aaKnown RBP7.11□□□□□ -1.27
CENPE-208ENST00000611174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.1□□□□□ -1.27
CENPE-208ENST00000611174 PABPN1Q86U42 306 aaKnown RBP eCLIP7.09□□□□□ -1.27
CENPE-208ENST00000611174 CNGB1Q14028 1251 aaPredicted RBP7.04□□□□□ -1.28
CENPE-208ENST00000611174 ABCC9O60706 1549 aa7.02□□□□□ -1.29
CENPE-208ENST00000611174 POLR3GLQ9BT43 218 aa6.98□□□□□ -1.29
CENPE-208ENST00000611174 NEFLP07196 543 aa6.93□□□□□ -1.3
CENPE-208ENST00000611174 DIEXFQ68CQ4 756 aaKnown RBP6.93□□□□□ -1.3
CENPE-208ENST00000611174 FAM50AQ14320 339 aaKnown RBP6.89□□□□□ -1.31
CENPE-208ENST00000611174 ERICH6Q7L0X2 663 aa6.89□□□□□ -1.31
CENPE-208ENST00000611174 MYT1LQ9UL68 1186 aa6.89□□□□□ -1.31
CENPE-208ENST00000611174 P3H3Q8IVL6 736 aa6.88□□□□□ -1.31
CENPE-208ENST00000611174 NEUROD1Q13562 356 aa6.87□□□□□ -1.31
CENPE-208ENST00000611174 CSRNP3Q8WYN3 585 aa6.87□□□□□ -1.31
CENPE-208ENST00000611174 ARID3CA6NKF2 412 aa6.85□□□□□ -1.31
CENPE-208ENST00000611174 GTF3C3Q9Y5Q9 886 aa6.82□□□□□ -1.32
CENPE-208ENST00000611174 TRIM52Q96A61 297 aa6.81□□□□□ -1.32
CENPE-208ENST00000611174 BCANQ96GW7 911 aa6.81□□□□□ -1.32
CENPE-208ENST00000611174 FBLN2P98095 1184 aa6.8□□□□□ -1.32
CENPE-208ENST00000611174 ZNF326Q5BKZ1 582 aaKnown RBP6.79□□□□□ -1.32
CENPE-208ENST00000611174 ZNF316A6NFI3 1004 aaPredicted RBP6.76□□□□□ -1.33
CENPE-208ENST00000611174 SLC4A1APQ9BWU0 796 aaKnown RBP6.74□□□□□ -1.33
CENPE-208ENST00000611174 ACIN1Q9UKV3 1341 aaKnown RBP6.7□□□□□ -1.34
CENPE-208ENST00000611174 ZNF777Q9ULD5 760 aaPredicted RBP6.69□□□□□ -1.34
CENPE-208ENST00000611174 HIRIP3Q9BW71 556 aaPredicted RBP6.69□□□□□ -1.34
CENPE-208ENST00000611174 MYO15BQ96JP2 1530 aa6.68□□□□□ -1.34
CENPE-208ENST00000611174 SCRIBQ14160 1630 aa6.68□□□□□ -1.34
CENPE-208ENST00000611174 ZCCHC6Q5VYS8 1495 aaKnown RBP6.68□□□□□ -1.34
CENPE-208ENST00000611174 DDX10Q13206 875 aaKnown RBP6.68□□□□□ -1.34
CENPE-208ENST00000611174 ANP32CO43423 234 aa6.67□□□□□ -1.34
CENPE-208ENST00000611174 CHIC2Q9UKJ5 165 aa6.66□□□□□ -1.34
CENPE-208ENST00000611174 DAXXQ9UER7 740 aaPredicted RBP6.63□□□□□ -1.35
CENPE-208ENST00000611174 CLSPNQ9HAW4 1339 aa6.63□□□□□ -1.35
CENPE-208ENST00000611174 MIER1Q8N108 512 aa6.63□□□□□ -1.35
CENPE-208ENST00000611174 BCL11AQ9H165 835 aa6.62□□□□□ -1.35
CENPE-208ENST00000611174 RSF1Q96T23 1441 aaPredicted RBP6.62□□□□□ -1.35
CENPE-208ENST00000611174 MYT1Q01538 1121 aa6.61□□□□□ -1.35
CENPE-208ENST00000611174 SALL2Q9Y467 1007 aaPredicted RBP6.61□□□□□ -1.35
CENPE-208ENST00000611174 SENP3-EIF4A1A0A087X0R7 540 aa6.61□□□□□ -1.35
CENPE-208ENST00000611174 SCAF1Q9H7N4 1312 aaKnown RBP6.59□□□□□ -1.36
CENPE-208ENST00000611174 DCAF1Q9Y4B6 1507 aa6.58□□□□□ -1.36
CENPE-208ENST00000611174 HNRNPUQ00839 825 aaKnown RBP eCLIP6.58□□□□□ -1.36
CENPE-208ENST00000611174 FKBP8Q14318 412 aa6.58□□□□□ -1.36
CENPE-208ENST00000611174 FAM9BQ8IZU0 186 aa6.58□□□□□ -1.36
CENPE-208ENST00000611174 TONSLQ96HA7 1378 aa6.56□□□□□ -1.36
CENPE-208ENST00000611174 RRP7BPQ9NSQ0 103 aa6.55□□□□□ -1.36
CENPE-208ENST00000611174 CDK11AQ9UQ88 783 aaPredicted RBP6.55□□□□□ -1.36
CENPE-208ENST00000611174 KDM2AQ9Y2K7 1162 aa6.55□□□□□ -1.36
CENPE-208ENST00000611174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.55□□□□□ -1.368e-8■■■■□ 25
CENPE-208ENST00000611174 CLIP1P30622 1438 aa6.55□□□□□ -1.36
CENPE-208ENST00000611174 CHGAP10645 457 aaKnown RBP6.55□□□□□ -1.36
CENPE-208ENST00000611174 IRX6P78412 446 aaPredicted RBP6.55□□□□□ -1.36
CENPE-208ENST00000611174 SENP3Q9H4L4 574 aaPredicted RBP6.54□□□□□ -1.36
CENPE-208ENST00000611174 CECR2Q9BXF3 1484 aa6.54□□□□□ -1.36
CENPE-208ENST00000611174 RTL5Q5HYW3 569 aaPredicted RBP6.53□□□□□ -1.36
CENPE-208ENST00000611174 SIN3AQ96ST3 1273 aa6.53□□□□□ -1.36
CENPE-208ENST00000611174 CEP162Q5TB80 1403 aa6.51□□□□□ -1.37
CENPE-208ENST00000611174 MTUS2Q5JR59 1369 aa6.51□□□□□ -1.37
CENPE-208ENST00000611174 PLPPR3Q6T4P5 718 aa6.5□□□□□ -1.37
CENPE-208ENST00000611174 NPM2Q86SE8 214 aaKnown RBP6.5□□□□□ -1.37
CENPE-208ENST00000611174 MRS2Q9HD23 443 aa6.5□□□□□ -1.37
CENPE-208ENST00000611174 TSPY4P0CV99 314 aa6.49□□□□□ -1.37
CENPE-208ENST00000611174 TSPY10P0CW01 314 aa6.49□□□□□ -1.37
CENPE-208ENST00000611174 RGL3Q3MIN7 710 aa6.49□□□□□ -1.37
CENPE-208ENST00000611174 SLC24A1O60721 1099 aa6.49□□□□□ -1.37
CENPE-208ENST00000611174 KCNH8Q96L42 1107 aa6.48□□□□□ -1.37
CENPE-208ENST00000611174 TMC1Q8TDI8 760 aa6.48□□□□□ -1.37
CENPE-208ENST00000611174 CHMP7Q8WUX9 453 aaPredicted RBP6.48□□□□□ -1.37
CENPE-208ENST00000611174 WRNQ14191 1432 aaPredicted RBP eCLIP6.48□□□□□ -1.37
CENPE-208ENST00000611174 SOGA1O94964 1423 aa6.47□□□□□ -1.37
CENPE-208ENST00000611174 CANXP27824 592 aaKnown RBP6.46□□□□□ -1.37
CENPE-208ENST00000611174 KANK4Q5T7N3 995 aaPredicted RBP6.45□□□□□ -1.38
CENPE-208ENST00000611174 EIF4G2P78344 907 aaKnown RBP eCLIP6.44□□□□□ -1.38
CENPE-208ENST00000611174 TNIKQ9UKE5 1360 aa6.44□□□□□ -1.38
CENPE-208ENST00000611174 CCDC136Q96JN2 1154 aa6.43□□□□□ -1.38
CENPE-208ENST00000611174 NPM1P06748 294 aaKnown RBP eCLIP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms