RNA–Protein interactions for RNA: ENST00000380026.7

CENPE-202, Transcript of centromere protein E, humanhuman

TSL 1 (best) BASIC

Gene CENPE, Length 8,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-202ENST00000380026 NISCHQ9Y2I1 1504 aa8.68□□□□□ -1.02
CENPE-202ENST00000380026 DCAF8L2P0C7V8 631 aa8.25□□□□□ -1.09
CENPE-202ENST00000380026 SUPT5HO00267 1087 aaKnown RBP8.01□□□□□ -1.13
CENPE-202ENST00000380026 SHROOM4Q9ULL8 1493 aa7.99□□□□□ -1.13
CENPE-202ENST00000380026 EHMT2Q96KQ7 1210 aa7.54□□□□□ -1.2
CENPE-202ENST00000380026 FAM9AQ8IZU1 332 aaPredicted RBP7.49□□□□□ -1.21
CENPE-202ENST00000380026 CHIC1Q5VXU3 224 aa7.43□□□□□ -1.22
CENPE-202ENST00000380026 PCGF6Q9BYE7 350 aa7.42□□□□□ -1.22
CENPE-202ENST00000380026 TRIM41Q8WV44 630 aa7.38□□□□□ -1.23
CENPE-202ENST00000380026 LOC105371045A0A1W2PR82 267 aa7.32□□□□□ -1.24
CENPE-202ENST00000380026 TTBK1Q5TCY1 1321 aaPredicted RBP7.27□□□□□ -1.25
CENPE-202ENST00000380026 ABCC9O60706 1549 aa7.27□□□□□ -1.25
CENPE-202ENST00000380026 ZCCHC6Q5VYS8 1495 aaKnown RBP7.23□□□□□ -1.25
CENPE-202ENST00000380026 PPARGC1BQ86YN6 1023 aaKnown RBP7.2□□□□□ -1.26
CENPE-202ENST00000380026 RANGAP1P46060 587 aaPredicted RBP7.19□□□□□ -1.26
CENPE-202ENST00000380026 UBTFP17480 764 aaKnown RBP7.18□□□□□ -1.26
CENPE-202ENST00000380026 PABPN1Q86U42 306 aaKnown RBP eCLIP7.16□□□□□ -1.26
CENPE-202ENST00000380026 APLP2Q06481 763 aa7.16□□□□□ -1.26
CENPE-202ENST00000380026 HRCP23327 699 aa7.14□□□□□ -1.27
CENPE-202ENST00000380026 TRIM26Q12899 539 aaPredicted RBP7.12□□□□□ -1.27
CENPE-202ENST00000380026 CCER1Q8TC90 406 aaPredicted RBP7.09□□□□□ -1.28
CENPE-202ENST00000380026 ZEB1P37275 1124 aaPredicted RBP7.04□□□□□ -1.28
CENPE-202ENST00000380026 CCDC180Q9P1Z9 1646 aa7.02□□□□□ -1.29
CENPE-202ENST00000380026 RSF1Q96T23 1441 aaPredicted RBP6.98□□□□□ -1.29
CENPE-202ENST00000380026 ATP1B4Q9UN42 357 aaPredicted RBP6.98□□□□□ -1.29
CENPE-202ENST00000380026 SCRIBQ14160 1630 aa6.98□□□□□ -1.29
CENPE-202ENST00000380026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.97□□□□□ -1.29
CENPE-202ENST00000380026 HNRNPUL2Q1KMD3 747 aaKnown RBP6.96□□□□□ -1.3
CENPE-202ENST00000380026 MYO15BQ96JP2 1530 aa6.96□□□□□ -1.3
CENPE-202ENST00000380026 CSRNP3Q8WYN3 585 aa6.95□□□□□ -1.3
CENPE-202ENST00000380026 ITGAEP38570 1179 aa6.91□□□□□ -1.3
CENPE-202ENST00000380026 DCAF1Q9Y4B6 1507 aa6.91□□□□□ -1.3
CENPE-202ENST00000380026 CECR2Q9BXF3 1484 aa6.9□□□□□ -1.3
CENPE-202ENST00000380026 CENPBP07199 599 aaPredicted RBP6.84□□□□□ -1.31
CENPE-202ENST00000380026 YTHDC1Q96MU7 727 aaKnown RBP6.83□□□□□ -1.32
CENPE-202ENST00000380026 NACADO15069 1562 aa6.8□□□□□ -1.32
CENPE-202ENST00000380026 DIEXFQ68CQ4 756 aaKnown RBP6.77□□□□□ -1.33
CENPE-202ENST00000380026 MROH2BQ7Z745 1585 aa6.77□□□□□ -1.33
CENPE-202ENST00000380026 P3H3Q8IVL6 736 aa6.76□□□□□ -1.33
CENPE-202ENST00000380026 RB1CC1Q8TDY2 1594 aa6.76□□□□□ -1.33
CENPE-202ENST00000380026 FAM50AQ14320 339 aaKnown RBP6.73□□□□□ -1.33
CENPE-202ENST00000380026 WRNQ14191 1432 aaPredicted RBP eCLIP6.72□□□□□ -1.33
CENPE-202ENST00000380026 BAZ1AQ9NRL2 1556 aaPredicted RBP6.72□□□□□ -1.33
CENPE-202ENST00000380026 SOGA1O94964 1423 aa6.7□□□□□ -1.34
CENPE-202ENST00000380026 CEP162Q5TB80 1403 aa6.7□□□□□ -1.34
CENPE-202ENST00000380026 CLIP1P30622 1438 aa6.69□□□□□ -1.34
CENPE-202ENST00000380026 PELP1Q8IZL8 1130 aaKnown RBP6.68□□□□□ -1.34
CENPE-202ENST00000380026 ARID3CA6NKF2 412 aa6.68□□□□□ -1.34
CENPE-202ENST00000380026 EEA1Q15075 1411 aa6.67□□□□□ -1.34
CENPE-202ENST00000380026 ZNF316A6NFI3 1004 aaPredicted RBP6.67□□□□□ -1.34
CENPE-202ENST00000380026 NEUROD1Q13562 356 aa6.67□□□□□ -1.34
CENPE-202ENST00000380026 TNIKQ9UKE5 1360 aa6.66□□□□□ -1.34
CENPE-202ENST00000380026 CCDC88BA6NC98 1476 aa6.66□□□□□ -1.34
CENPE-202ENST00000380026 BAZ1BQ9UIG0 1483 aaKnown RBP6.66□□□□□ -1.34
CENPE-202ENST00000380026 FBLN2P98095 1184 aa6.65□□□□□ -1.34
CENPE-202ENST00000380026 CNGB1Q14028 1251 aaPredicted RBP6.62□□□□□ -1.35
CENPE-202ENST00000380026 GOLGA3Q08378 1498 aa6.62□□□□□ -1.35
CENPE-202ENST00000380026 ABCC8Q09428 1581 aa6.61□□□□□ -1.35
CENPE-202ENST00000380026 TRIM52Q96A61 297 aa6.61□□□□□ -1.35
CENPE-202ENST00000380026 GTF3C3Q9Y5Q9 886 aa6.6□□□□□ -1.35
CENPE-202ENST00000380026 POLR3GLQ9BT43 218 aa6.6□□□□□ -1.35
CENPE-202ENST00000380026 CEP164Q9UPV0 1460 aa6.59□□□□□ -1.36
CENPE-202ENST00000380026 NEFLP07196 543 aa6.58□□□□□ -1.36
CENPE-202ENST00000380026 WIZO95785 1651 aa6.58□□□□□ -1.36
CENPE-202ENST00000380026 KIF27Q86VH2 1401 aa6.58□□□□□ -1.36
CENPE-202ENST00000380026 ACIN1Q9UKV3 1341 aaKnown RBP6.58□□□□□ -1.36
CENPE-202ENST00000380026 RUSC2Q8N2Y8 1516 aa6.57□□□□□ -1.36
CENPE-202ENST00000380026 ATAD2BQ9ULI0 1458 aa6.56□□□□□ -1.36
CENPE-202ENST00000380026 KANK4Q5T7N3 995 aaPredicted RBP6.55□□□□□ -1.36
CENPE-202ENST00000380026 CHIC2Q9UKJ5 165 aa6.55□□□□□ -1.36
CENPE-202ENST00000380026 MIER1Q8N108 512 aa6.54□□□□□ -1.36
CENPE-202ENST00000380026 ZNF326Q5BKZ1 582 aaKnown RBP6.54□□□□□ -1.36
CENPE-202ENST00000380026 MYT1LQ9UL68 1186 aa6.54□□□□□ -1.36
CENPE-202ENST00000380026 ZNF777Q9ULD5 760 aaPredicted RBP6.53□□□□□ -1.36
CENPE-202ENST00000380026 MTUS2Q5JR59 1369 aa6.53□□□□□ -1.36
CENPE-202ENST00000380026 TOP2AP11388 1531 aaKnown RBP6.53□□□□□ -1.36
CENPE-202ENST00000380026 VPS8Q8N3P4 1428 aa6.53□□□□□ -1.36
CENPE-202ENST00000380026 DDX10Q13206 875 aaKnown RBP6.52□□□□□ -1.37
CENPE-202ENST00000380026 HIRIP3Q9BW71 556 aaPredicted RBP6.52□□□□□ -1.37
CENPE-202ENST00000380026 CUX2O14529 1486 aa6.52□□□□□ -1.37
CENPE-202ENST00000380026 CARMIL1Q5VZK9 1371 aa6.52□□□□□ -1.37
CENPE-202ENST00000380026 CDK11AQ9UQ88 783 aaPredicted RBP6.52□□□□□ -1.37
CENPE-202ENST00000380026 SCAF1Q9H7N4 1312 aaKnown RBP6.5□□□□□ -1.37
CENPE-202ENST00000380026 TDRD9Q8NDG6 1382 aaKnown RBP6.49□□□□□ -1.37
CENPE-202ENST00000380026 RAPGEF2Q9Y4G8 1499 aa6.49□□□□□ -1.37
CENPE-202ENST00000380026 TONSLQ96HA7 1378 aa6.49□□□□□ -1.37
CENPE-202ENST00000380026 CADPSQ9ULU8 1353 aa6.49□□□□□ -1.37
CENPE-202ENST00000380026 SMARCA4P51532 1647 aa6.49□□□□□ -1.37
CENPE-202ENST00000380026 ANP32CO43423 234 aa6.49□□□□□ -1.37
CENPE-202ENST00000380026 RRP7BPQ9NSQ0 103 aa6.48□□□□□ -1.37
CENPE-202ENST00000380026 SMARCA2P51531 1590 aa6.48□□□□□ -1.37
CENPE-202ENST00000380026 BCANQ96GW7 911 aa6.48□□□□□ -1.37
CENPE-202ENST00000380026 SIN3AQ96ST3 1273 aa6.48□□□□□ -1.37
CENPE-202ENST00000380026 CHMP7Q8WUX9 453 aaPredicted RBP6.47□□□□□ -1.37
CENPE-202ENST00000380026 CCNB3Q8WWL7 1395 aa6.47□□□□□ -1.37
CENPE-202ENST00000380026 CLSPNQ9HAW4 1339 aa6.44□□□□□ -1.38
CENPE-202ENST00000380026 TSPY4P0CV99 314 aa6.42□□□□□ -1.38
CENPE-202ENST00000380026 TSPY10P0CW01 314 aa6.42□□□□□ -1.38
CENPE-202ENST00000380026 IGF1RP08069 1367 aa6.42□□□□□ -1.38
CENPE-202ENST00000380026 NCAPD3P42695 1498 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms