Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 AL021920.2-201ENST00000624828 1351 ntBASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC68Q9H2F9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC68Q9H2F9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.96■□□□□ 0.3
CCDC68Q9H2F9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.96■□□□□ 0.3
CCDC68Q9H2F9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CCDC68Q9H2F9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.96■□□□□ 0.3
CCDC68Q9H2F9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC68Q9H2F9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC68Q9H2F9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 AL353135.1-201ENST00000606729 504 ntBASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 AL589182.2-201ENST00000619332 1049 ntBASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 REXO1L6P-202ENST00000619970 1078 ntBASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 AC063926.3-201ENST00000624734 5658 ntBASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC68Q9H2F9 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.94■□□□□ 0.3
CCDC68Q9H2F9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms