Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.656e-7■■□□□ 12.6
XRN2Q9H0D6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.48□□□□□ -1.856e-7■■□□□ 12.6
XRN2Q9H0D6 NDUFA10-209ENST00000448880 434 ntTSL 52.89□□□□□ -1.956e-7■■□□□ 12.6
XRN2Q9H0D6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.999e-7■■□□□ 12.6
XRN2Q9H0D6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.999e-7■■□□□ 12.6
XRN2Q9H0D6 PKP4-204ENST00000421462 3099 ntTSL 215.68■□□□□ 0.13e-6■■□□□ 12.6
XRN2Q9H0D6 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.124e-6■■□□□ 12.6
XRN2Q9H0D6 EPS8L2-209ENST00000527199 540 ntTSL 326.71■■□□□ 1.878e-8■■□□□ 12.6
XRN2Q9H0D6 EPS8L2-214ENST00000529680 551 ntTSL 417.99■□□□□ 0.478e-8■■□□□ 12.6
XRN2Q9H0D6 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.36□□□□□ -0.272e-7■■□□□ 12.6
XRN2Q9H0D6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.13■■□□□ 1.614e-9■■□□□ 12.6
XRN2Q9H0D6 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.02■■□□□ 1.923e-10■■□□□ 12.6
XRN2Q9H0D6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.653e-10■■□□□ 12.6
XRN2Q9H0D6 AK3-204ENST00000611749 4029 ntTSL 4 BASIC10.53□□□□□ -0.723e-10■■□□□ 12.6
XRN2Q9H0D6 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC7.4□□□□□ -1.223e-10■■□□□ 12.6
XRN2Q9H0D6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.294e-7■■□□□ 12.6
XRN2Q9H0D6 CALR-206ENST00000588454 776 ntTSL 313.81□□□□□ -0.24e-7■■□□□ 12.6
XRN2Q9H0D6 SPHK1-208ENST00000591651 541 ntTSL 424.23■■□□□ 1.472e-7■■□□□ 12.6
XRN2Q9H0D6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.57■■□□□ 1.683e-6■■□□□ 12.6
XRN2Q9H0D6 BRD2-216ENST00000581002 550 ntTSL 424.23■■□□□ 1.473e-6■■□□□ 12.6
XRN2Q9H0D6 BRD2-217ENST00000584808 547 ntTSL 424.23■■□□□ 1.473e-6■■□□□ 12.6
XRN2Q9H0D6 BRD2-215ENST00000580234 718 ntTSL 421.48■■□□□ 1.033e-6■■□□□ 12.6
XRN2Q9H0D6 MSI2-216ENST00000582772 398 ntTSL 37.13□□□□□ -1.272e-6■■□□□ 12.6
XRN2Q9H0D6 LPIN2-203ENST00000584294 936 ntTSL 321.02■□□□□ 0.963e-12■■□□□ 12.6
XRN2Q9H0D6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.348e-7■■□□□ 12.5
XRN2Q9H0D6 NDRG1-223ENST00000522665 411 ntTSL 216.63■□□□□ 0.257e-8■■□□□ 12.5
XRN2Q9H0D6 NDRG1-217ENST00000521414 2349 ntTSL 213.86□□□□□ -0.197e-8■■□□□ 12.5
XRN2Q9H0D6 AC016831.1-202ENST00000447307 726 ntTSL 39.33□□□□□ -0.928e-11■■□□□ 12.5
XRN2Q9H0D6 NDRG1-212ENST00000519278 3983 ntTSL 29.27□□□□□ -0.927e-8■■□□□ 12.5
XRN2Q9H0D6 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.48□□□□□ -1.218e-11■■□□□ 12.5
XRN2Q9H0D6 AC016831.1-203ENST00000418546 578 ntTSL 47.15□□□□□ -1.268e-11■■□□□ 12.5
XRN2Q9H0D6 LINC00963-210ENST00000608272 612 ntTSL 516.32■□□□□ 0.25e-6■■□□□ 12.5
XRN2Q9H0D6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.61□□□□□ -0.071e-6■■□□□ 12.5
XRN2Q9H0D6 AL645922.1-202ENST00000477310 3377 ntTSL 5 BASIC10.77□□□□□ -0.694e-6■■□□□ 12.5
XRN2Q9H0D6 AL645922.1-201ENST00000456570 3874 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.84e-6■■□□□ 12.5
XRN2Q9H0D6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.12■■□□□ 1.451e-6■■□□□ 12.5
XRN2Q9H0D6 ECHDC2-206ENST00000467988 702 ntTSL 523.69■■□□□ 1.381e-6■■□□□ 12.5
XRN2Q9H0D6 ECHDC2-202ENST00000371520 1606 ntTSL 1 (best)21.84■■□□□ 1.091e-6■■□□□ 12.5
XRN2Q9H0D6 ECHDC2-208ENST00000476477 1676 ntTSL 218.75■□□□□ 0.591e-6■■□□□ 12.5
XRN2Q9H0D6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.431e-6■■□□□ 12.5
XRN2Q9H0D6 ECHDC2-204ENST00000460612 2645 ntTSL 216.6■□□□□ 0.251e-6■■□□□ 12.5
XRN2Q9H0D6 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC15.34■□□□□ 0.051e-6■■□□□ 12.5
XRN2Q9H0D6 EPS8L2-225ENST00000533816 540 ntTSL 524.79■■□□□ 1.561e-34■■□□□ 12.5
XRN2Q9H0D6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.97■■□□□ 1.913e-8■■□□□ 12.5
XRN2Q9H0D6 SPPL2B-204ENST00000587851 586 ntTSL 325.33■■□□□ 1.657e-10■■□□□ 12.5
XRN2Q9H0D6 SEC13-207ENST00000397105 883 ntTSL 224.25■■□□□ 1.471e-7■■□□□ 12.5
XRN2Q9H0D6 SEC13-217ENST00000482647 782 ntTSL 224.25■■□□□ 1.471e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-210ENST00000422647 573 ntTSL 421.9■■□□□ 1.11e-7■■□□□ 12.5
XRN2Q9H0D6 YTHDF2-203ENST00000474884 864 ntTSL 521.58■■□□□ 1.051e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.25■□□□□ 0.991e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-214ENST00000427931 567 ntTSL 421.08■□□□□ 0.971e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-206ENST00000416144 1496 ntTSL 320.88■□□□□ 0.931e-7■■□□□ 12.5
XRN2Q9H0D6 YTHDF2-207ENST00000496288 879 ntTSL 220.62■□□□□ 0.891e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-217ENST00000452314 545 ntTSL 220.47■□□□□ 0.871e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.47■□□□□ 0.871e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.42■□□□□ 0.861e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.35■□□□□ 0.851e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-205ENST00000412636 655 ntTSL 220.22■□□□□ 0.831e-7■■□□□ 12.5
XRN2Q9H0D6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.831e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-223ENST00000493947 593 ntTSL 420.22■□□□□ 0.831e-7■■□□□ 12.5
XRN2Q9H0D6 AURKB-210ENST00000583124 323 ntTSL 319.85■□□□□ 0.771e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-221ENST00000489320 671 ntTSL 219.66■□□□□ 0.741e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.63■□□□□ 0.731e-7■■□□□ 12.5
XRN2Q9H0D6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.641e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.02■□□□□ 0.641e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-220ENST00000488751 924 ntTSL 318.94■□□□□ 0.621e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-211ENST00000423973 1441 ntTSL 1 (best)18.67■□□□□ 0.581e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-208ENST00000422164 793 ntTSL 218.6■□□□□ 0.571e-7■■□□□ 12.5
XRN2Q9H0D6 YTHDF2-206ENST00000478283 2594 ntTSL 1 (best)18.54■□□□□ 0.561e-7■■□□□ 12.5
XRN2Q9H0D6 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.27■□□□□ 0.521e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-219ENST00000467680 1979 ntTSL 218■□□□□ 0.471e-7■■□□□ 12.5
XRN2Q9H0D6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.391e-7■■□□□ 12.5
XRN2Q9H0D6 SEC13-215ENST00000477547 1313 ntTSL 217.37■□□□□ 0.371e-7■■□□□ 12.5
XRN2Q9H0D6 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.17■□□□□ 0.341e-7■■□□□ 12.5
XRN2Q9H0D6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.84■□□□□ 0.291e-14■■□□□ 12.5
XRN2Q9H0D6 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.241e-7■■□□□ 12.5
XRN2Q9H0D6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.171e-14■■□□□ 12.5
XRN2Q9H0D6 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.151e-7■■□□□ 12.5
XRN2Q9H0D6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.98■□□□□ 0.157e-10■■□□□ 12.5
XRN2Q9H0D6 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.141e-7■■□□□ 12.5
XRN2Q9H0D6 AURKB-211ENST00000583915 397 ntTSL 215.88■□□□□ 0.131e-7■■□□□ 12.5
XRN2Q9H0D6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.131e-7■■□□□ 12.5
XRN2Q9H0D6 HMGCS1-205ENST00000508319 591 ntTSL 315.72■□□□□ 0.111e-7■■□□□ 12.5
XRN2Q9H0D6 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC15.57■□□□□ 0.081e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-209ENST00000422422 782 ntTSL 314.88□□□□□ -0.031e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.051e-7■■□□□ 12.5
XRN2Q9H0D6 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.071e-7■■□□□ 12.5
XRN2Q9H0D6 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.11e-14■■□□□ 12.5
XRN2Q9H0D6 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC14.24□□□□□ -0.131e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.131e-7■■□□□ 12.5
XRN2Q9H0D6 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.181e-7■■□□□ 12.5
XRN2Q9H0D6 TRIM25-205ENST00000572021 1555 ntTSL 1 (best)13.78□□□□□ -0.21e-7■■□□□ 12.5
XRN2Q9H0D6 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.211e-7■■□□□ 12.5
XRN2Q9H0D6 SEC13-216ENST00000479868 2374 ntTSL 1 (best)13.21□□□□□ -0.291e-7■■□□□ 12.5
XRN2Q9H0D6 GPI-213ENST00000590362 378 ntTSL 513.13□□□□□ -0.311e-7■■□□□ 12.5
XRN2Q9H0D6 CHD2-217ENST00000629136 480 ntTSL 512.85□□□□□ -0.351e-7■■□□□ 12.5
XRN2Q9H0D6 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.351e-7■■□□□ 12.5
XRN2Q9H0D6 AURKB-212ENST00000584561 1010 ntTSL 312.66□□□□□ -0.381e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-204ENST00000394163 4528 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.41e-7■■□□□ 12.5
XRN2Q9H0D6 AURKB-203ENST00000577833 867 ntTSL 312.36□□□□□ -0.431e-7■■□□□ 12.5
Retrieved 100 of 21,068 protein–RNA pairs in 124.9 ms