RNA–Protein interactions for RNA: ENST00000394163.2

ZNF655-204, Transcript of zinc finger protein 655, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF655, Length 4,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF655-204ENST00000394163 NISCHQ9Y2I1 1504 aa23.12■■□□□ 1.29
ZNF655-204ENST00000394163 DCAF8L2P0C7V8 631 aa22.52■■□□□ 1.2
ZNF655-204ENST00000394163 SHROOM4Q9ULL8 1493 aa21.27■□□□□ 0.99
ZNF655-204ENST00000394163 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
ZNF655-204ENST00000394163 ABCC9O60706 1549 aa20.18■□□□□ 0.82
ZNF655-204ENST00000394163 EHMT2Q96KQ7 1210 aa20.15■□□□□ 0.82
ZNF655-204ENST00000394163 PABPN1Q86U42 306 aaKnown RBP eCLIP19.79■□□□□ 0.76
ZNF655-204ENST00000394163 FAM9AQ8IZU1 332 aaPredicted RBP19.74■□□□□ 0.75
ZNF655-204ENST00000394163 RANGAP1P46060 587 aaPredicted RBP19.37■□□□□ 0.69
ZNF655-204ENST00000394163 TRIM41Q8WV44 630 aa19.35■□□□□ 0.69
ZNF655-204ENST00000394163 TTBK1Q5TCY1 1321 aaPredicted RBP19.25■□□□□ 0.67
ZNF655-204ENST00000394163 CCDC180Q9P1Z9 1646 aa19.16■□□□□ 0.66
ZNF655-204ENST00000394163 ZCCHC6Q5VYS8 1495 aaKnown RBP19.15■□□□□ 0.66
ZNF655-204ENST00000394163 SCRIBQ14160 1630 aa19.07■□□□□ 0.64
ZNF655-204ENST00000394163 UBTFP17480 764 aaKnown RBP18.97■□□□□ 0.63
ZNF655-204ENST00000394163 CHIC1Q5VXU3 224 aa18.93■□□□□ 0.62
ZNF655-204ENST00000394163 ATP1B4Q9UN42 357 aaPredicted RBP18.91■□□□□ 0.62
ZNF655-204ENST00000394163 APLP2Q06481 763 aa18.88■□□□□ 0.61
ZNF655-204ENST00000394163 LOC105371045A0A1W2PR82 267 aa18.88■□□□□ 0.61
ZNF655-204ENST00000394163 PPARGC1BQ86YN6 1023 aaKnown RBP18.84■□□□□ 0.61
ZNF655-204ENST00000394163 PCGF6Q9BYE7 350 aa18.72■□□□□ 0.59
ZNF655-204ENST00000394163 RB1CC1Q8TDY2 1594 aa18.66■□□□□ 0.58
ZNF655-204ENST00000394163 NACADO15069 1562 aa18.53■□□□□ 0.56
ZNF655-204ENST00000394163 CECR2Q9BXF3 1484 aa18.4■□□□□ 0.54
ZNF655-204ENST00000394163 FBLN2P98095 1184 aa18.4■□□□□ 0.54
ZNF655-204ENST00000394163 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.39■□□□□ 0.53
ZNF655-204ENST00000394163 HNRNPUL2Q1KMD3 747 aaKnown RBP18.39■□□□□ 0.53
ZNF655-204ENST00000394163 RSF1Q96T23 1441 aaPredicted RBP18.36■□□□□ 0.53
ZNF655-204ENST00000394163 ITGAEP38570 1179 aa18.3■□□□□ 0.52
ZNF655-204ENST00000394163 DCAF1Q9Y4B6 1507 aa18.26■□□□□ 0.51
ZNF655-204ENST00000394163 P3H3Q8IVL6 736 aa18.19■□□□□ 0.5
ZNF655-204ENST00000394163 CCER1Q8TC90 406 aaPredicted RBP18.16■□□□□ 0.5
ZNF655-204ENST00000394163 ARID3CA6NKF2 412 aa18.15■□□□□ 0.5
ZNF655-204ENST00000394163 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
ZNF655-204ENST00000394163 BAZ1BQ9UIG0 1483 aaKnown RBP18.07■□□□□ 0.48
ZNF655-204ENST00000394163 MROH2BQ7Z745 1585 aa18.06■□□□□ 0.48
ZNF655-204ENST00000394163 MYT1LQ9UL68 1186 aa18.03■□□□□ 0.48
ZNF655-204ENST00000394163 BAZ1AQ9NRL2 1556 aaPredicted RBP17.98■□□□□ 0.47
ZNF655-204ENST00000394163 TRIM26Q12899 539 aaPredicted RBP17.97■□□□□ 0.47
ZNF655-204ENST00000394163 FAM50AQ14320 339 aaKnown RBP17.86■□□□□ 0.45
ZNF655-204ENST00000394163 MYO15BQ96JP2 1530 aa17.86■□□□□ 0.45
ZNF655-204ENST00000394163 WIZO95785 1651 aa17.79■□□□□ 0.44
ZNF655-204ENST00000394163 WRNQ14191 1432 aaPredicted RBP eCLIP17.77■□□□□ 0.44
ZNF655-204ENST00000394163 CCDC88BA6NC98 1476 aa17.76■□□□□ 0.43
ZNF655-204ENST00000394163 CHMP7Q8WUX9 453 aaPredicted RBP17.74■□□□□ 0.43
ZNF655-204ENST00000394163 ERCC6Q03468 1493 aa17.7■□□□□ 0.42
ZNF655-204ENST00000394163 ATAD2BQ9ULI0 1458 aa17.67■□□□□ 0.42
ZNF655-204ENST00000394163 ZNF777Q9ULD5 760 aaPredicted RBP17.64■□□□□ 0.41
ZNF655-204ENST00000394163 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
ZNF655-204ENST00000394163 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
ZNF655-204ENST00000394163 SMARCA2P51531 1590 aa17.6■□□□□ 0.41
ZNF655-204ENST00000394163 SOGA1O94964 1423 aa17.58■□□□□ 0.41
ZNF655-204ENST00000394163 ZEB1P37275 1124 aaPredicted RBP17.57■□□□□ 0.4
ZNF655-204ENST00000394163 TRIM52Q96A61 297 aa17.57■□□□□ 0.4
ZNF655-204ENST00000394163 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
ZNF655-204ENST00000394163 CNGB1Q14028 1251 aaPredicted RBP17.55■□□□□ 0.4
ZNF655-204ENST00000394163 POLR3GLQ9BT43 218 aa17.53■□□□□ 0.4
ZNF655-204ENST00000394163 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.4
ZNF655-204ENST00000394163 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
ZNF655-204ENST00000394163 CADPSQ9ULU8 1353 aa17.49■□□□□ 0.39
ZNF655-204ENST00000394163 KIF27Q86VH2 1401 aa17.47■□□□□ 0.39
ZNF655-204ENST00000394163 TOP2AP11388 1531 aaKnown RBP17.47■□□□□ 0.39
ZNF655-204ENST00000394163 CUX2O14529 1486 aa17.46■□□□□ 0.39
ZNF655-204ENST00000394163 HRCP23327 699 aa17.45■□□□□ 0.38
ZNF655-204ENST00000394163 CLIP1P30622 1438 aa17.44■□□□□ 0.38
ZNF655-204ENST00000394163 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
ZNF655-204ENST00000394163 KCNH8Q96L42 1107 aa17.41■□□□□ 0.38
ZNF655-204ENST00000394163 CHIC2Q9UKJ5 165 aa17.41■□□□□ 0.38
ZNF655-204ENST00000394163 PDS5BQ9NTI5 1447 aa17.41■□□□□ 0.38
ZNF655-204ENST00000394163 CDK11AQ9UQ88 783 aaPredicted RBP17.4■□□□□ 0.38
ZNF655-204ENST00000394163 NPM1P06748 294 aaKnown RBP eCLIP17.39■□□□□ 0.37
ZNF655-204ENST00000394163 YTHDC1Q96MU7 727 aaKnown RBP17.38■□□□□ 0.37
ZNF655-204ENST00000394163 CEP162Q5TB80 1403 aa17.36■□□□□ 0.37
ZNF655-204ENST00000394163 ZNF326Q5BKZ1 582 aaKnown RBP17.35■□□□□ 0.37
ZNF655-204ENST00000394163 CARMIL1Q5VZK9 1371 aa17.35■□□□□ 0.37
ZNF655-204ENST00000394163 PLPPR3Q6T4P5 718 aa17.33■□□□□ 0.37
ZNF655-204ENST00000394163 GOLGA3Q08378 1498 aa17.32■□□□□ 0.36
ZNF655-204ENST00000394163 BICRAQ9NZM4 1560 aa17.31■□□□□ 0.36
ZNF655-204ENST00000394163 EEA1Q15075 1411 aa17.29■□□□□ 0.36
ZNF655-204ENST00000394163 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
ZNF655-204ENST00000394163 RUSC2Q8N2Y8 1516 aa17.28■□□□□ 0.36
ZNF655-204ENST00000394163 NCAPD3P42695 1498 aa17.27■□□□□ 0.36
ZNF655-204ENST00000394163 NESP48681 1621 aa17.27■□□□□ 0.36
ZNF655-204ENST00000394163 FANCD2Q9BXW9 1451 aa17.27■□□□□ 0.35
ZNF655-204ENST00000394163 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
ZNF655-204ENST00000394163 CC2D2AQ9P2K1 1620 aa17.22■□□□□ 0.35
ZNF655-204ENST00000394163 TNIKQ9UKE5 1360 aa17.21■□□□□ 0.35
ZNF655-204ENST00000394163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.2■□□□□ 0.34
ZNF655-204ENST00000394163 PLEKHD1A6NEE1 506 aa17.17■□□□□ 0.34
ZNF655-204ENST00000394163 SLC4A1APQ9BWU0 796 aaKnown RBP17.17■□□□□ 0.34
ZNF655-204ENST00000394163 RRP7BPQ9NSQ0 103 aa17.16■□□□□ 0.34
ZNF655-204ENST00000394163 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
ZNF655-204ENST00000394163 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
ZNF655-204ENST00000394163 TSPY4P0CV99 314 aa17.09■□□□□ 0.33
ZNF655-204ENST00000394163 TSPY10P0CW01 314 aa17.09■□□□□ 0.33
ZNF655-204ENST00000394163 CHGAP10645 457 aaKnown RBP17.08■□□□□ 0.32
ZNF655-204ENST00000394163 KANK4Q5T7N3 995 aaPredicted RBP17.07■□□□□ 0.32
ZNF655-204ENST00000394163 RAPGEF2Q9Y4G8 1499 aa17.07■□□□□ 0.32
ZNF655-204ENST00000394163 CFDP1Q9UEE9 299 aaPredicted RBP17.05■□□□□ 0.32
ZNF655-204ENST00000394163 FGD5Q6ZNL6 1462 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms