Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SLC46A1Q96NT5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC46A1Q96NT5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
SLC46A1Q96NT5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC46A1Q96NT5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SLC46A1Q96NT5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC46A1Q96NT5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 AC012569.1-201ENST00000591191 1524 ntBASIC16.09■□□□□ 0.17
SLC46A1Q96NT5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC46A1Q96NT5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.08■□□□□ 0.17
SLC46A1Q96NT5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.08■□□□□ 0.17
SLC46A1Q96NT5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 AC097493.3-201ENST00000509725 367 ntBASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 AC069120.2-201ENST00000524091 540 ntBASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 PP12613-201ENST00000424958 2230 ntBASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC46A1Q96NT5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 AC109635.5-201ENST00000533593 962 ntBASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC46A1Q96NT5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms