Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCC2Q8TAQ2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCC2Q8TAQ2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCC2Q8TAQ2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SMARCC2Q8TAQ2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCC2Q8TAQ2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.75■□□□□ 0.75
SMARCC2Q8TAQ2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SMARCC2Q8TAQ2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.75■□□□□ 0.75
SMARCC2Q8TAQ2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.75■□□□□ 0.75
SMARCC2Q8TAQ2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 IGHV3-65-201ENST00000523210 341 ntBASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 AC027601.4-201ENST00000611259 610 ntBASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCC2Q8TAQ2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 AC006277.1-201ENST00000624348 1610 ntBASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 MED15P5-201ENST00000423150 992 ntBASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 AC108073.2-201ENST00000464002 357 ntBASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 AC140113.2-201ENST00000604370 208 ntBASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCC2Q8TAQ2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 AC007967.2-201ENST00000432613 625 ntBASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 HLA-J-202ENST00000469281 1241 ntBASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 MIR4751-201ENST00000578027 74 ntBASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 PI4KAP1-204ENST00000612579 1703 ntBASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 REXO1L3P-201ENST00000622202 1288 ntBASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 SNX33P1-201ENST00000592116 1762 ntBASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms