Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC155Q8N6L0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC155Q8N6L0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC155Q8N6L0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC155Q8N6L0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 AC068137.2-201ENST00000605408 478 ntBASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC155Q8N6L0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 OR6D1P-203ENST00000641209 4860 ntBASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 FAM8A3P-201ENST00000427218 844 ntBASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC155Q8N6L0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC155Q8N6L0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms