Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC008608.2-201ENST00000606089 416 ntBASIC16.11■□□□□ 0.17
KRT20P35900 AC009336.1-201ENST00000608941 1553 ntBASIC16.11■□□□□ 0.17
KRT20P35900 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT20P35900 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT20P35900 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT20P35900 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT20P35900 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
KRT20P35900 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT20P35900 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT20P35900 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT20P35900 AC016396.2-201ENST00000562575 1417 ntBASIC16.11■□□□□ 0.17
KRT20P35900 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 AC132938.5-201ENST00000624980 1813 ntBASIC16.1■□□□□ 0.17
KRT20P35900 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT20P35900 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.1■□□□□ 0.17
KRT20P35900 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT20P35900 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT20P35900 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT20P35900 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT20P35900 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT20P35900 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT20P35900 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT20P35900 AC106795.1-205ENST00000512851 1056 ntBASIC16.1■□□□□ 0.17
KRT20P35900 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.1■□□□□ 0.17
KRT20P35900 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.1■□□□□ 0.17
KRT20P35900 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT20P35900 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT20P35900 AP001269.4-201ENST00000609611 512 ntBASIC16.1■□□□□ 0.17
KRT20P35900 REXO1L6P-202ENST00000619970 1078 ntBASIC16.1■□□□□ 0.17
KRT20P35900 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KRT20P35900 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
KRT20P35900 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
KRT20P35900 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KRT20P35900 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT20P35900 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT20P35900 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT20P35900 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT20P35900 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
KRT20P35900 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
KRT20P35900 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
KRT20P35900 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
KRT20P35900 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 AC116353.5-201ENST00000638148 1699 ntBASIC16.09■□□□□ 0.17
KRT20P35900 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
KRT20P35900 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT20P35900 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT20P35900 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 AC004870.1-201ENST00000315132 882 ntBASIC16.09■□□□□ 0.17
KRT20P35900 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT20P35900 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
KRT20P35900 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT20P35900 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.09■□□□□ 0.17
KRT20P35900 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.09■□□□□ 0.17
KRT20P35900 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.09■□□□□ 0.17
KRT20P35900 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT20P35900 AL139288.1-201ENST00000623748 933 ntBASIC16.09■□□□□ 0.17
KRT20P35900 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT20P35900 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT20P35900 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms