Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
PTPN3P26045 AC092910.1-201ENST00000482027 1129 ntBASIC17.2■□□□□ 0.34
PTPN3P26045 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN3P26045 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN3P26045 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN3P26045 AL139011.1-202ENST00000642063 584 ntBASIC17.2■□□□□ 0.34
PTPN3P26045 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN3P26045 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN3P26045 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN3P26045 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
PTPN3P26045 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN3P26045 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN3P26045 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN3P26045 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN3P26045 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN3P26045 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN3P26045 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN3P26045 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PTPN3P26045 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN3P26045 SLC22A20-204ENST00000530038 1673 ntBASIC17.2■□□□□ 0.34
PTPN3P26045 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN3P26045 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PTPN3P26045 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN3P26045 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PTPN3P26045 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PTPN3P26045 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PTPN3P26045 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PTPN3P26045 PMS2P1-201ENST00000431037 1228 ntBASIC17.19■□□□□ 0.34
PTPN3P26045 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 AC108073.2-201ENST00000464002 357 ntBASIC17.19■□□□□ 0.34
PTPN3P26045 HLA-J-202ENST00000469281 1241 ntBASIC17.19■□□□□ 0.34
PTPN3P26045 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.19■□□□□ 0.34
PTPN3P26045 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.19■□□□□ 0.34
PTPN3P26045 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN3P26045 AC091167.2-201ENST00000579581 588 ntBASIC17.19■□□□□ 0.34
PTPN3P26045 SLC25A6P4-201ENST00000586535 553 ntBASIC17.19■□□□□ 0.34
PTPN3P26045 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.19■□□□□ 0.34
PTPN3P26045 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN3P26045 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPN3P26045 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 PCDHB19P-201ENST00000570871 2371 ntBASIC17.19■□□□□ 0.34
PTPN3P26045 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPN3P26045 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PTPN3P26045 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPN3P26045 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.19■□□□□ 0.34
PTPN3P26045 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN3P26045 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN3P26045 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPN3P26045 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN3P26045 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN3P26045 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.18■□□□□ 0.34
PTPN3P26045 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN3P26045 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN3P26045 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PTPN3P26045 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN3P26045 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN3P26045 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN3P26045 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.18■□□□□ 0.34
PTPN3P26045 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN3P26045 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN3P26045 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PTPN3P26045 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN3P26045 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.18■□□□□ 0.34
PTPN3P26045 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.18■□□□□ 0.34
PTPN3P26045 AC009078.2-202ENST00000463353 338 ntBASIC17.18■□□□□ 0.34
PTPN3P26045 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.18■□□□□ 0.34
PTPN3P26045 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.18■□□□□ 0.34
PTPN3P26045 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.18■□□□□ 0.34
PTPN3P26045 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PTPN3P26045 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.18■□□□□ 0.34
PTPN3P26045 OR7E47P-204ENST00000575924 449 ntBASIC17.18■□□□□ 0.34
PTPN3P26045 AC004790.2-201ENST00000623588 572 ntBASIC17.18■□□□□ 0.34
PTPN3P26045 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN3P26045 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN3P26045 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN3P26045 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN3P26045 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PTPN3P26045 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PTPN3P26045 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
PTPN3P26045 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
PTPN3P26045 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN3P26045 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PTPN3P26045 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
PTPN3P26045 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN3P26045 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPN3P26045 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PTPN3P26045 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms