Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SPDYE7P-202ENST00000420373 878 ntBASIC19.79■□□□□ 0.76
HLA-DOAP06340 FAM8A3P-201ENST00000427218 844 ntBASIC19.79■□□□□ 0.76
HLA-DOAP06340 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.79■□□□□ 0.76
HLA-DOAP06340 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 SPDYE14P-201ENST00000442619 822 ntBASIC19.79■□□□□ 0.76
HLA-DOAP06340 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.79■□□□□ 0.76
HLA-DOAP06340 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.79■□□□□ 0.76
HLA-DOAP06340 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DOAP06340 SPCS2P1-201ENST00000561636 679 ntBASIC19.79■□□□□ 0.76
HLA-DOAP06340 MIR3197-201ENST00000582241 73 ntBASIC19.79■□□□□ 0.76
HLA-DOAP06340 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.79■□□□□ 0.76
HLA-DOAP06340 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.79■□□□□ 0.76
HLA-DOAP06340 LINC02084-201ENST00000606069 1096 ntBASIC19.79■□□□□ 0.76
HLA-DOAP06340 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DOAP06340 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.79■□□□□ 0.76
HLA-DOAP06340 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DOAP06340 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HLA-DOAP06340 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.79■□□□□ 0.76
HLA-DOAP06340 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 AC051619.7-201ENST00000568314 623 ntBASIC19.78■□□□□ 0.76
HLA-DOAP06340 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 AC005498.2-205ENST00000593218 784 ntBASIC19.78■□□□□ 0.76
HLA-DOAP06340 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.78■□□□□ 0.76
HLA-DOAP06340 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOAP06340 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
HLA-DOAP06340 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
HLA-DOAP06340 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
HLA-DOAP06340 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HLA-DOAP06340 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
HLA-DOAP06340 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.77■□□□□ 0.76
HLA-DOAP06340 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
HLA-DOAP06340 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HLA-DOAP06340 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.77■□□□□ 0.76
HLA-DOAP06340 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.77■□□□□ 0.76
HLA-DOAP06340 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
HLA-DOAP06340 MIR346-201ENST00000362234 95 ntBASIC19.77■□□□□ 0.76
HLA-DOAP06340 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
HLA-DOAP06340 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.77■□□□□ 0.76
HLA-DOAP06340 KLF2P3-201ENST00000451977 1087 ntBASIC19.77■□□□□ 0.76
HLA-DOAP06340 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 ALG1L8P-201ENST00000533887 760 ntBASIC19.77■□□□□ 0.76
HLA-DOAP06340 DUX4L27-201ENST00000554796 1261 ntBASIC19.77■□□□□ 0.76
HLA-DOAP06340 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms