Protein–RNA interactions for Protein: O75955

FLOT1, Flotillin-1, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1O75955 MIR3909-201ENST00000579518 119 ntBASIC19.45■□□□□ 0.7
FLOT1O75955 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FLOT1O75955 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.45■□□□□ 0.7
FLOT1O75955 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.45■□□□□ 0.7
FLOT1O75955 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
FLOT1O75955 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.45■□□□□ 0.7
FLOT1O75955 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FLOT1O75955 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FLOT1O75955 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.45■□□□□ 0.7
FLOT1O75955 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
FLOT1O75955 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.45■□□□□ 0.7
FLOT1O75955 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FLOT1O75955 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FLOT1O75955 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FLOT1O75955 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.45■□□□□ 0.7
FLOT1O75955 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FLOT1O75955 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.45■□□□□ 0.7
FLOT1O75955 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FLOT1O75955 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FLOT1O75955 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.44■□□□□ 0.7
FLOT1O75955 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.44■□□□□ 0.7
FLOT1O75955 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
FLOT1O75955 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FLOT1O75955 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FLOT1O75955 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FLOT1O75955 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.44■□□□□ 0.7
FLOT1O75955 AC016027.1-202ENST00000607927 1699 ntBASIC19.44■□□□□ 0.7
FLOT1O75955 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FLOT1O75955 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FLOT1O75955 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FLOT1O75955 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.44■□□□□ 0.7
FLOT1O75955 KLF2P3-201ENST00000451977 1087 ntBASIC19.44■□□□□ 0.7
FLOT1O75955 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.44■□□□□ 0.7
FLOT1O75955 SLC25A39P2-201ENST00000537614 270 ntBASIC19.44■□□□□ 0.7
FLOT1O75955 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.44■□□□□ 0.7
FLOT1O75955 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.44■□□□□ 0.7
FLOT1O75955 AC026150.2-201ENST00000564693 1156 ntBASIC19.44■□□□□ 0.7
FLOT1O75955 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
FLOT1O75955 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.44■□□□□ 0.7
FLOT1O75955 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.44■□□□□ 0.7
FLOT1O75955 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.44■□□□□ 0.7
FLOT1O75955 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.44■□□□□ 0.7
FLOT1O75955 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FLOT1O75955 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FLOT1O75955 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FLOT1O75955 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FLOT1O75955 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
FLOT1O75955 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FLOT1O75955 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.44■□□□□ 0.7
FLOT1O75955 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FLOT1O75955 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FLOT1O75955 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FLOT1O75955 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.43■□□□□ 0.7
FLOT1O75955 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
FLOT1O75955 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FLOT1O75955 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FLOT1O75955 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
FLOT1O75955 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FLOT1O75955 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FLOT1O75955 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
FLOT1O75955 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.43■□□□□ 0.7
FLOT1O75955 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.43■□□□□ 0.7
FLOT1O75955 SPDYE14P-201ENST00000442619 822 ntBASIC19.43■□□□□ 0.7
FLOT1O75955 AC125807.1-201ENST00000483097 614 ntBASIC19.43■□□□□ 0.7
FLOT1O75955 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.43■□□□□ 0.7
FLOT1O75955 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FLOT1O75955 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.43■□□□□ 0.7
FLOT1O75955 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.43■□□□□ 0.7
FLOT1O75955 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.43■□□□□ 0.7
FLOT1O75955 AC008267.7-201ENST00000624570 1194 ntBASIC19.43■□□□□ 0.7
FLOT1O75955 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.43■□□□□ 0.7
FLOT1O75955 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.43■□□□□ 0.7
FLOT1O75955 AC084121.4-201ENST00000641598 221 ntBASIC19.43■□□□□ 0.7
FLOT1O75955 AF228730.8-201ENST00000642140 221 ntBASIC19.43■□□□□ 0.7
FLOT1O75955 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
FLOT1O75955 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FLOT1O75955 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FLOT1O75955 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
FLOT1O75955 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.43■□□□□ 0.7
FLOT1O75955 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.43■□□□□ 0.7
FLOT1O75955 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FLOT1O75955 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
FLOT1O75955 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
FLOT1O75955 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FLOT1O75955 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FLOT1O75955 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
FLOT1O75955 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FLOT1O75955 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FLOT1O75955 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FLOT1O75955 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FLOT1O75955 AC008677.1-201ENST00000519230 1561 ntBASIC19.42■□□□□ 0.7
FLOT1O75955 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.42■□□□□ 0.7
FLOT1O75955 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
FLOT1O75955 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.42■□□□□ 0.7
FLOT1O75955 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.42■□□□□ 0.7
FLOT1O75955 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.42■□□□□ 0.7
FLOT1O75955 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FLOT1O75955 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FLOT1O75955 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FLOT1O75955 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms