Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 FGFR3P6-201ENST00000457012 610 ntBASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 AC124947.2-201ENST00000547118 1133 ntBASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 GPR89P-201ENST00000407924 1495 ntBASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DRB4X5D2U9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DRB4X5D2U9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.77□□□□□ -0.36
HLA-DRB4X5D2U9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.77□□□□□ -0.36
HLA-DRB4X5D2U9 AC004817.3-201ENST00000602957 2129 ntBASIC12.77□□□□□ -0.36
HLA-DRB4X5D2U9 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DRB4X5D2U9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DRB4X5D2U9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DRB4X5D2U9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DRB4X5D2U9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DRB4X5D2U9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
HLA-DRB4X5D2U9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.77□□□□□ -0.36
HLA-DRB4X5D2U9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DRB4X5D2U9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DRB4X5D2U9 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DRB4X5D2U9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 LINC00982-205ENST00000420957 435 ntBASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 AC022188.1-201ENST00000620960 1664 ntBASIC12.77□□□□□ -0.37
HLA-DRB4X5D2U9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.76□□□□□ -0.37
HLA-DRB4X5D2U9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms