Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.23■□□□□ 0.03
ZNF346Q9UL40 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF346Q9UL40 AL391256.1-201ENST00000443260 1855 ntBASIC15.23■□□□□ 0.03
ZNF346Q9UL40 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 AL139384.1-201ENST00000612143 3047 ntBASIC15.22■□□□□ 0.03
ZNF346Q9UL40 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 TERC-201ENST00000602385 541 ntBASIC15.22■□□□□ 0.03
ZNF346Q9UL40 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 AL355877.3-201ENST00000622820 899 ntBASIC15.22■□□□□ 0.03
ZNF346Q9UL40 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF346Q9UL40 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 DOC2GP-204ENST00000639052 2548 ntBASIC15.21■□□□□ 0.03
ZNF346Q9UL40 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF346Q9UL40 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms