Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 WFDC1-204ENST00000613603 549 ntBASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 AC090164.3-201ENST00000610780 2143 ntBASIC19.97■□□□□ 0.79
ZNF541Q9H0D2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 AC104581.1-202ENST00000635932 2618 ntBASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 AC007389.4-201ENST00000454674 793 ntBASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 MIR6787-201ENST00000616675 61 ntBASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF541Q9H0D2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 FRMD8P1-201ENST00000440433 1524 ntBASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ZNF541Q9H0D2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF541Q9H0D2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF541Q9H0D2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF541Q9H0D2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.94■□□□□ 0.78
ZNF541Q9H0D2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF541Q9H0D2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
ZNF541Q9H0D2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF541Q9H0D2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF541Q9H0D2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF541Q9H0D2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF541Q9H0D2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ZNF541Q9H0D2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms