Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF3Q8N9W5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.24■□□□□ 0.35
DNAAF3Q8N9W5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.24■□□□□ 0.35
DNAAF3Q8N9W5 AL589182.2-201ENST00000619332 1049 ntBASIC17.24■□□□□ 0.35
DNAAF3Q8N9W5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF3Q8N9W5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF3Q8N9W5 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF3Q8N9W5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
DNAAF3Q8N9W5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
DNAAF3Q8N9W5 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF3Q8N9W5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
DNAAF3Q8N9W5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF3Q8N9W5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF3Q8N9W5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 AL645728.1-201ENST00000366221 2101 ntBASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 AP002414.1-201ENST00000391405 1147 ntBASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 FGFR3P6-201ENST00000457012 610 ntBASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 SART3-203ENST00000546611 1184 ntBASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 MTDHP4-201ENST00000600287 670 ntBASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 REXO1L6P-202ENST00000619970 1078 ntBASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
DNAAF3Q8N9W5 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 AC139887.3-201ENST00000568585 713 ntBASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 AL139424.1-201ENST00000607572 797 ntBASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF3Q8N9W5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms