Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.07■□□□□ 0.32
WNT3AP56704 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.07■□□□□ 0.32
WNT3AP56704 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.07■□□□□ 0.32
WNT3AP56704 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.07■□□□□ 0.32
WNT3AP56704 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
WNT3AP56704 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.07■□□□□ 0.32
WNT3AP56704 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
WNT3AP56704 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
WNT3AP56704 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
WNT3AP56704 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
WNT3AP56704 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.07■□□□□ 0.32
WNT3AP56704 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.07■□□□□ 0.32
WNT3AP56704 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
WNT3AP56704 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
WNT3AP56704 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.06■□□□□ 0.32
WNT3AP56704 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 UBALD1-205ENST00000590891 2641 ntBASIC17.06■□□□□ 0.32
WNT3AP56704 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.06■□□□□ 0.32
WNT3AP56704 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 HLA-A-202ENST00000376806 1854 ntBASIC17.06■□□□□ 0.32
WNT3AP56704 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.06■□□□□ 0.32
WNT3AP56704 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
WNT3AP56704 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
WNT3AP56704 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.06■□□□□ 0.32
WNT3AP56704 PMS2P1-201ENST00000431037 1228 ntBASIC17.06■□□□□ 0.32
WNT3AP56704 RNA5SP415-201ENST00000517246 115 ntBASIC17.06■□□□□ 0.32
WNT3AP56704 UNC93B6-202ENST00000528242 690 ntBASIC17.06■□□□□ 0.32
WNT3AP56704 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.06■□□□□ 0.32
WNT3AP56704 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.06■□□□□ 0.32
WNT3AP56704 AC091167.2-201ENST00000579581 588 ntBASIC17.06■□□□□ 0.32
WNT3AP56704 MIR4492-201ENST00000581627 80 ntBASIC17.06■□□□□ 0.32
WNT3AP56704 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.06■□□□□ 0.32
WNT3AP56704 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
WNT3AP56704 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.06■□□□□ 0.32
WNT3AP56704 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.06■□□□□ 0.32
WNT3AP56704 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
WNT3AP56704 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
WNT3AP56704 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.06■□□□□ 0.32
WNT3AP56704 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.06■□□□□ 0.32
WNT3AP56704 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
WNT3AP56704 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
WNT3AP56704 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
WNT3AP56704 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.05■□□□□ 0.32
WNT3AP56704 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
WNT3AP56704 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.05■□□□□ 0.32
WNT3AP56704 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.05■□□□□ 0.32
WNT3AP56704 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.05■□□□□ 0.32
WNT3AP56704 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.05■□□□□ 0.32
WNT3AP56704 IGHV3-22-201ENST00000520721 359 ntBASIC17.05■□□□□ 0.32
WNT3AP56704 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.05■□□□□ 0.32
WNT3AP56704 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.05■□□□□ 0.32
WNT3AP56704 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
WNT3AP56704 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.05■□□□□ 0.32
WNT3AP56704 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.05■□□□□ 0.32
WNT3AP56704 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.05■□□□□ 0.32
WNT3AP56704 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
WNT3AP56704 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.05■□□□□ 0.32
WNT3AP56704 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.05■□□□□ 0.32
WNT3AP56704 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.05■□□□□ 0.32
WNT3AP56704 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.05■□□□□ 0.32
WNT3AP56704 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
WNT3AP56704 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.04■□□□□ 0.32
WNT3AP56704 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.04■□□□□ 0.32
WNT3AP56704 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.04■□□□□ 0.32
WNT3AP56704 SLC22A20-204ENST00000530038 1673 ntBASIC17.04■□□□□ 0.32
WNT3AP56704 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms