Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC10.47□□□□□ -0.73
PDE6GP18545 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC10.47□□□□□ -0.73
PDE6GP18545 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC10.47□□□□□ -0.73
PDE6GP18545 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC10.47□□□□□ -0.73
PDE6GP18545 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
PDE6GP18545 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC10.47□□□□□ -0.73
PDE6GP18545 PHB2-213ENST00000546111 858 ntTSL 2 BASIC10.47□□□□□ -0.73
PDE6GP18545 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
PDE6GP18545 AC104390.1-201ENST00000555663 520 ntBASIC10.47□□□□□ -0.73
PDE6GP18545 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC10.47□□□□□ -0.73
PDE6GP18545 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC10.47□□□□□ -0.73
PDE6GP18545 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC10.47□□□□□ -0.73
PDE6GP18545 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PDE6GP18545 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC10.47□□□□□ -0.73
PDE6GP18545 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC10.47□□□□□ -0.73
PDE6GP18545 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC10.47□□□□□ -0.73
PDE6GP18545 AC011298.2-201ENST00000617989 482 ntBASIC10.47□□□□□ -0.73
PDE6GP18545 AL050303.2-201ENST00000619798 666 ntBASIC10.47□□□□□ -0.73
PDE6GP18545 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC10.47□□□□□ -0.73
PDE6GP18545 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PDE6GP18545 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PDE6GP18545 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PDE6GP18545 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PDE6GP18545 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PDE6GP18545 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC10.47□□□□□ -0.73
PDE6GP18545 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC10.47□□□□□ -0.73
PDE6GP18545 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC10.47□□□□□ -0.73
PDE6GP18545 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC10.47□□□□□ -0.73
PDE6GP18545 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC10.47□□□□□ -0.73
PDE6GP18545 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC10.47□□□□□ -0.73
PDE6GP18545 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC10.47□□□□□ -0.73
PDE6GP18545 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PDE6GP18545 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
PDE6GP18545 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PDE6GP18545 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PDE6GP18545 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PDE6GP18545 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
PDE6GP18545 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PDE6GP18545 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PDE6GP18545 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PDE6GP18545 DMBT1P1-203ENST00000636837 4628 ntBASIC10.46□□□□□ -0.73
PDE6GP18545 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PDE6GP18545 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
PDE6GP18545 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
PDE6GP18545 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PDE6GP18545 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PDE6GP18545 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
PDE6GP18545 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PDE6GP18545 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC10.46□□□□□ -0.73
PDE6GP18545 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PDE6GP18545 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PDE6GP18545 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC10.46□□□□□ -0.73
PDE6GP18545 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PDE6GP18545 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PDE6GP18545 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PDE6GP18545 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC10.46□□□□□ -0.73
PDE6GP18545 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
PDE6GP18545 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
PDE6GP18545 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
PDE6GP18545 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PDE6GP18545 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC10.46□□□□□ -0.73
PDE6GP18545 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PDE6GP18545 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PDE6GP18545 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC10.46□□□□□ -0.73
PDE6GP18545 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC10.46□□□□□ -0.73
PDE6GP18545 SLC29A4P2-201ENST00000504749 1089 ntBASIC10.46□□□□□ -0.73
PDE6GP18545 AF201337.1-201ENST00000520239 748 ntBASIC10.46□□□□□ -0.73
PDE6GP18545 AC026271.3-201ENST00000571884 352 ntBASIC10.46□□□□□ -0.73
PDE6GP18545 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC10.46□□□□□ -0.73
PDE6GP18545 RALB-208ENST00000631312 311 ntTSL 5 BASIC10.46□□□□□ -0.73
PDE6GP18545 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PDE6GP18545 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PDE6GP18545 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
PDE6GP18545 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
PDE6GP18545 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC10.46□□□□□ -0.74
PDE6GP18545 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC10.46□□□□□ -0.74
PDE6GP18545 TBC1D3P2-202ENST00000577902 1649 ntBASIC10.46□□□□□ -0.74
PDE6GP18545 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
PDE6GP18545 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC10.46□□□□□ -0.74
PDE6GP18545 AMT-250ENST00000637682 1823 ntTSL 5 BASIC10.46□□□□□ -0.74
PDE6GP18545 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC10.46□□□□□ -0.74
PDE6GP18545 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC10.46□□□□□ -0.74
PDE6GP18545 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PDE6GP18545 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC10.46□□□□□ -0.74
PDE6GP18545 ALOX12P2-203ENST00000570921 1945 ntBASIC10.46□□□□□ -0.74
PDE6GP18545 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC10.46□□□□□ -0.74
PDE6GP18545 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
PDE6GP18545 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC10.46□□□□□ -0.74
PDE6GP18545 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
PDE6GP18545 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
PDE6GP18545 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC10.46□□□□□ -0.74
PDE6GP18545 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
PDE6GP18545 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PDE6GP18545 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
PDE6GP18545 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PDE6GP18545 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PDE6GP18545 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
PDE6GP18545 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
PDE6GP18545 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
PDE6GP18545 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms