Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLN5O75503 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLN5O75503 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.88□□□□□ -0.19
CLN5O75503 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLN5O75503 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLN5O75503 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.88□□□□□ -0.19
CLN5O75503 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.88□□□□□ -0.19
CLN5O75503 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.88□□□□□ -0.19
CLN5O75503 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLN5O75503 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CLN5O75503 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.87□□□□□ -0.19
CLN5O75503 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLN5O75503 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.87□□□□□ -0.19
CLN5O75503 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.87□□□□□ -0.19
CLN5O75503 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 AL009178.2-201ENST00000597278 2719 ntBASIC13.87□□□□□ -0.19
CLN5O75503 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.87□□□□□ -0.19
CLN5O75503 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.87□□□□□ -0.19
CLN5O75503 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLN5O75503 FAM45BP-202ENST00000592932 1624 ntBASIC13.87□□□□□ -0.19
CLN5O75503 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN5O75503 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CLN5O75503 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CLN5O75503 AC113347.1-201ENST00000413321 391 ntBASIC13.87□□□□□ -0.19
CLN5O75503 SPDYE15P-201ENST00000424157 909 ntBASIC13.87□□□□□ -0.19
CLN5O75503 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN5O75503 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLN5O75503 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.87□□□□□ -0.19
CLN5O75503 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CLN5O75503 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CLN5O75503 AC005363.2-201ENST00000618631 242 ntBASIC13.87□□□□□ -0.19
CLN5O75503 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.87□□□□□ -0.19
CLN5O75503 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.87□□□□□ -0.19
CLN5O75503 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.87□□□□□ -0.19
CLN5O75503 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CLN5O75503 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLN5O75503 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN5O75503 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN5O75503 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN5O75503 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLN5O75503 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN5O75503 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
CLN5O75503 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN5O75503 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN5O75503 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.86□□□□□ -0.19
CLN5O75503 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLN5O75503 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN5O75503 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.86□□□□□ -0.19
CLN5O75503 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN5O75503 REXO1L11P-201ENST00000620964 1927 ntBASIC13.86□□□□□ -0.19
CLN5O75503 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
CLN5O75503 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN5O75503 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN5O75503 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLN5O75503 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN5O75503 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLN5O75503 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN5O75503 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN5O75503 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
CLN5O75503 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
CLN5O75503 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN5O75503 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN5O75503 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLN5O75503 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CLN5O75503 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.86□□□□□ -0.19
CLN5O75503 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.86□□□□□ -0.19
CLN5O75503 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.86□□□□□ -0.19
CLN5O75503 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.86□□□□□ -0.19
CLN5O75503 AC011558.1-201ENST00000623459 338 ntBASIC13.86□□□□□ -0.19
CLN5O75503 AC133561.5-201ENST00000635547 218 ntBASIC13.86□□□□□ -0.19
CLN5O75503 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CLN5O75503 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms