Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 AC006449.5-201ENST00000610658 2098 ntBASIC13.62□□□□□ -0.23
SRRM4A7MD48 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 PAWRP1-201ENST00000451083 565 ntBASIC13.62□□□□□ -0.23
SRRM4A7MD48 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 AC021087.4-201ENST00000563761 564 ntBASIC13.62□□□□□ -0.23
SRRM4A7MD48 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.62□□□□□ -0.23
SRRM4A7MD48 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 AC025062.2-201ENST00000605477 670 ntBASIC13.62□□□□□ -0.23
SRRM4A7MD48 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
SRRM4A7MD48 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SRRM4A7MD48 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 ALOX12P2-203ENST00000570921 1945 ntBASIC13.61□□□□□ -0.23
SRRM4A7MD48 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 SAPCD2P3-201ENST00000455031 850 ntBASIC13.61□□□□□ -0.23
SRRM4A7MD48 SCARNA2-201ENST00000458748 420 ntBASIC13.61□□□□□ -0.23
SRRM4A7MD48 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 CLEC4GP1-201ENST00000596555 870 ntBASIC13.61□□□□□ -0.23
SRRM4A7MD48 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 AC092364.2-201ENST00000596710 2692 ntBASIC13.61□□□□□ -0.23
SRRM4A7MD48 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRRM4A7MD48 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.61□□□□□ -0.23
SRRM4A7MD48 AC006277.1-201ENST00000624348 1610 ntBASIC13.61□□□□□ -0.23
SRRM4A7MD48 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRRM4A7MD48 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SRRM4A7MD48 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.6□□□□□ -0.23
SRRM4A7MD48 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SRRM4A7MD48 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.6□□□□□ -0.23
SRRM4A7MD48 DOC2GP-204ENST00000639052 2548 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms