Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 AC098935.1-201ENST00000446057 611 ntBASIC6.77□□□□□ -1.33
MACF1Q9UPN3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 RNU1-129P-201ENST00000384064 167 ntBASIC6.77□□□□□ -1.33
MACF1Q9UPN3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 AC025279.2-201ENST00000569730 653 ntBASIC6.77□□□□□ -1.33
MACF1Q9UPN3 AC109462.3-201ENST00000573934 613 ntBASIC6.77□□□□□ -1.33
MACF1Q9UPN3 U1.21-201ENST00000580816 167 ntBASIC6.77□□□□□ -1.33
MACF1Q9UPN3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 RPL14-203ENST00000416518 812 ntTSL 3 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 CLUHP6-201ENST00000580789 941 ntBASIC6.77□□□□□ -1.33
MACF1Q9UPN3 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC6.77□□□□□ -1.33
MACF1Q9UPN3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 AC008132.1-202ENST00000342005 1389 ntBASIC6.77□□□□□ -1.33
MACF1Q9UPN3 KRT8P12-202ENST00000472924 1397 ntBASIC6.77□□□□□ -1.33
MACF1Q9UPN3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 MIR4649-201ENST00000582839 64 ntBASIC6.77□□□□□ -1.33
MACF1Q9UPN3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MACF1Q9UPN3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
MACF1Q9UPN3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms