Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 AC096582.2-201ENST00000510860 516 ntBASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 AL121672.3-201ENST00000608644 468 ntBASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 AC233702.3-201ENST00000578656 1387 ntBASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.33□□□□□ -0.12
HDHD3Q9BSH5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 TMPOP1-202ENST00000424642 1267 ntBASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 DUX4L17-201ENST00000557360 1267 ntBASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 AC005332.1-201ENST00000577698 1310 ntBASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HDHD3Q9BSH5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 INTS4P1-201ENST00000438455 1935 ntBASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 PMPCAP1-201ENST00000508114 1576 ntBASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 RCN1P2-201ENST00000398357 915 ntBASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 AL031133.1-201ENST00000406807 723 ntBASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.31□□□□□ -0.12
HDHD3Q9BSH5 MINOS1P3-201ENST00000457048 203 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms