Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCAMP4Q969E2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCAMP4Q969E2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCAMP4Q969E2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.77■□□□□ 0.27
SCAMP4Q969E2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 RPSAP43-201ENST00000402237 625 ntBASIC16.76■□□□□ 0.27
SCAMP4Q969E2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 GPX1P2-201ENST00000429271 606 ntBASIC16.76■□□□□ 0.27
SCAMP4Q969E2 AC112482.1-201ENST00000492080 688 ntBASIC16.76■□□□□ 0.27
SCAMP4Q969E2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 AL031432.2-201ENST00000566714 459 ntBASIC16.76■□□□□ 0.27
SCAMP4Q969E2 AL928711.1-201ENST00000570165 459 ntBASIC16.76■□□□□ 0.27
SCAMP4Q969E2 AL078644.1-201ENST00000609881 752 ntBASIC16.76■□□□□ 0.27
SCAMP4Q969E2 AL645728.2-201ENST00000641974 660 ntBASIC16.76■□□□□ 0.27
SCAMP4Q969E2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.76■□□□□ 0.27
SCAMP4Q969E2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 UPF3AP3-201ENST00000420996 769 ntBASIC16.75■□□□□ 0.27
SCAMP4Q969E2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 DNAJB3-201ENST00000446806 729 ntBASIC16.75■□□□□ 0.27
SCAMP4Q969E2 ALG1L5P-201ENST00000482043 771 ntBASIC16.75■□□□□ 0.27
SCAMP4Q969E2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 MIR4492-201ENST00000581627 80 ntBASIC16.75■□□□□ 0.27
SCAMP4Q969E2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 AC105020.1-201ENST00000435356 2205 ntBASIC16.75■□□□□ 0.27
SCAMP4Q969E2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 AL645728.1-201ENST00000366221 2101 ntBASIC16.75■□□□□ 0.27
SCAMP4Q969E2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCAMP4Q969E2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 AC087641.1-201ENST00000557561 1021 ntBASIC16.74■□□□□ 0.27
SCAMP4Q969E2 AC068137.2-201ENST00000605408 478 ntBASIC16.74■□□□□ 0.27
SCAMP4Q969E2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.74■□□□□ 0.27
SCAMP4Q969E2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCAMP4Q969E2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms