Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 AC105917.1-201ENST00000506637 2539 ntBASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 AC063952.2-201ENST00000498792 1227 ntBASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM42Q8IWZ5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 AL365203.3-201ENST00000609742 2057 ntBASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 ARMC10P1-201ENST00000313754 855 ntBASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 AL441883.1-201ENST00000566170 1045 ntBASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 LINC01238-205ENST00000567549 1107 ntBASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 NTF6B-201ENST00000591913 560 ntBASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 AL135999.2-201ENST00000622438 1686 ntBASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 AL049757.1-201ENST00000616842 1596 ntBASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 AL645728.1-201ENST00000366221 2101 ntBASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 AC092364.2-201ENST00000596710 2692 ntBASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM42Q8IWZ5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRIM42Q8IWZ5 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms