Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.84□□□□□ -0.19
SPCS3P61009 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SPCS3P61009 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SPCS3P61009 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.83□□□□□ -0.19
SPCS3P61009 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.83□□□□□ -0.2
SPCS3P61009 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.83□□□□□ -0.2
SPCS3P61009 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SPCS3P61009 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 GPR89P-201ENST00000407924 1495 ntBASIC13.83□□□□□ -0.2
SPCS3P61009 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SPCS3P61009 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.83□□□□□ -0.2
SPCS3P61009 RNF152P1-201ENST00000397754 604 ntBASIC13.83□□□□□ -0.2
SPCS3P61009 AC113347.1-201ENST00000413321 391 ntBASIC13.83□□□□□ -0.2
SPCS3P61009 AC117947.1-201ENST00000427448 529 ntBASIC13.83□□□□□ -0.2
SPCS3P61009 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.83□□□□□ -0.2
SPCS3P61009 AC112907.2-201ENST00000448639 330 ntBASIC13.83□□□□□ -0.2
SPCS3P61009 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.83□□□□□ -0.2
SPCS3P61009 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 VENTXP5-201ENST00000523979 775 ntBASIC13.83□□□□□ -0.2
SPCS3P61009 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.83□□□□□ -0.2
SPCS3P61009 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SPCS3P61009 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.83□□□□□ -0.2
SPCS3P61009 RNF126P1-202ENST00000569893 925 ntBASIC13.83□□□□□ -0.2
SPCS3P61009 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
SPCS3P61009 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SPCS3P61009 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.83□□□□□ -0.2
SPCS3P61009 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.83□□□□□ -0.2
SPCS3P61009 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.83□□□□□ -0.2
SPCS3P61009 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.83□□□□□ -0.2
SPCS3P61009 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SPCS3P61009 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPCS3P61009 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.82□□□□□ -0.2
SPCS3P61009 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.82□□□□□ -0.2
SPCS3P61009 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.82□□□□□ -0.2
SPCS3P61009 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.82□□□□□ -0.2
SPCS3P61009 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.82□□□□□ -0.2
SPCS3P61009 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.82□□□□□ -0.2
SPCS3P61009 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SPCS3P61009 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
SPCS3P61009 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
SPCS3P61009 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.82□□□□□ -0.2
SPCS3P61009 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.82□□□□□ -0.2
SPCS3P61009 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.82□□□□□ -0.2
SPCS3P61009 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.82□□□□□ -0.2
SPCS3P61009 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
SPCS3P61009 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.82□□□□□ -0.2
SPCS3P61009 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.82□□□□□ -0.2
SPCS3P61009 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.82□□□□□ -0.2
SPCS3P61009 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.82□□□□□ -0.2
SPCS3P61009 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 AC006449.5-201ENST00000610658 2098 ntBASIC13.82□□□□□ -0.2
SPCS3P61009 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.82□□□□□ -0.2
SPCS3P61009 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
SPCS3P61009 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms