Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 RBM17P3-201ENST00000417687 1192 ntBASIC16.45■□□□□ 0.22
CLCN2P51788 AC026396.1-201ENST00000419388 421 ntBASIC16.45■□□□□ 0.22
CLCN2P51788 AC103564.2-201ENST00000432853 1299 ntBASIC16.45■□□□□ 0.22
CLCN2P51788 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.45■□□□□ 0.22
CLCN2P51788 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.45■□□□□ 0.22
CLCN2P51788 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
CLCN2P51788 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
CLCN2P51788 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN2P51788 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.45■□□□□ 0.22
CLCN2P51788 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.45■□□□□ 0.22
CLCN2P51788 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.45■□□□□ 0.22
CLCN2P51788 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.45■□□□□ 0.22
CLCN2P51788 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.45■□□□□ 0.22
CLCN2P51788 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CLCN2P51788 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN2P51788 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN2P51788 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN2P51788 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN2P51788 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN2P51788 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.45■□□□□ 0.22
CLCN2P51788 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN2P51788 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN2P51788 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CLCN2P51788 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN2P51788 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.45■□□□□ 0.22
CLCN2P51788 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.45■□□□□ 0.22
CLCN2P51788 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.45■□□□□ 0.22
CLCN2P51788 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN2P51788 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN2P51788 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCN2P51788 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCN2P51788 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLCN2P51788 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 ABCD1P5-201ENST00000445663 754 ntBASIC16.44■□□□□ 0.22
CLCN2P51788 AC079781.3-201ENST00000449110 356 ntBASIC16.44■□□□□ 0.22
CLCN2P51788 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.44■□□□□ 0.22
CLCN2P51788 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.44■□□□□ 0.22
CLCN2P51788 AF238378.1-201ENST00000526806 358 ntBASIC16.44■□□□□ 0.22
CLCN2P51788 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCN2P51788 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 AC008608.2-201ENST00000606089 416 ntBASIC16.44■□□□□ 0.22
CLCN2P51788 AL031008.1-201ENST00000619963 541 ntBASIC16.44■□□□□ 0.22
CLCN2P51788 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLCN2P51788 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCN2P51788 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CLCN2P51788 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.44■□□□□ 0.22
CLCN2P51788 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 FAM45BP-202ENST00000592932 1624 ntBASIC16.44■□□□□ 0.22
CLCN2P51788 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
CLCN2P51788 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCN2P51788 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CLCN2P51788 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN2P51788 FER1L4-210ENST00000615531 5998 ntBASIC16.44■□□□□ 0.22
CLCN2P51788 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLCN2P51788 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLCN2P51788 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.43■□□□□ 0.22
CLCN2P51788 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN2P51788 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN2P51788 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN2P51788 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN2P51788 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN2P51788 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CLCN2P51788 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN2P51788 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN2P51788 TCAF2P1-201ENST00000291129 2421 ntBASIC16.43■□□□□ 0.22
CLCN2P51788 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN2P51788 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN2P51788 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.43■□□□□ 0.22
CLCN2P51788 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN2P51788 AC106795.1-205ENST00000512851 1056 ntBASIC16.43■□□□□ 0.22
CLCN2P51788 AL160237.2-201ENST00000556165 472 ntBASIC16.43■□□□□ 0.22
CLCN2P51788 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN2P51788 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCN2P51788 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCN2P51788 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN2P51788 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLCN2P51788 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLCN2P51788 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN2P51788 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN2P51788 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN2P51788 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN2P51788 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCN2P51788 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN2P51788 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CLCN2P51788 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN2P51788 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms