Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCL3P19876 AC002558.1-201ENST00000488906 803 ntBASIC14.23□□□□□ -0.13
CXCL3P19876 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCL3P19876 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.23□□□□□ -0.13
CXCL3P19876 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.23□□□□□ -0.13
CXCL3P19876 CR769767.2-201ENST00000622735 460 ntBASIC14.23□□□□□ -0.13
CXCL3P19876 CR392000.1-201ENST00000624770 1228 ntBASIC14.23□□□□□ -0.13
CXCL3P19876 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCL3P19876 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CXCL3P19876 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CXCL3P19876 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.23□□□□□ -0.13
CXCL3P19876 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CXCL3P19876 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CXCL3P19876 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CXCL3P19876 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCL3P19876 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CXCL3P19876 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCL3P19876 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CXCL3P19876 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CXCL3P19876 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCL3P19876 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.22□□□□□ -0.13
CXCL3P19876 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCL3P19876 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCL3P19876 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCL3P19876 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.22□□□□□ -0.13
CXCL3P19876 RN7SL471P-201ENST00000580476 299 ntBASIC14.22□□□□□ -0.13
CXCL3P19876 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CXCL3P19876 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.22□□□□□ -0.13
CXCL3P19876 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCL3P19876 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCL3P19876 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CXCL3P19876 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CXCL3P19876 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCL3P19876 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCL3P19876 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCL3P19876 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL3P19876 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCL3P19876 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCL3P19876 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCL3P19876 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCL3P19876 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCL3P19876 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CXCL3P19876 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CXCL3P19876 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 AC005089.1-201ENST00000619486 2241 ntBASIC14.21□□□□□ -0.13
CXCL3P19876 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CXCL3P19876 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCL3P19876 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCL3P19876 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCL3P19876 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CXCL3P19876 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 CA15P1-201ENST00000481698 905 ntBASIC14.21□□□□□ -0.13
CXCL3P19876 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.21□□□□□ -0.13
CXCL3P19876 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 WWOX-216ENST00000569818 525 ntBASIC14.21□□□□□ -0.13
CXCL3P19876 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCL3P19876 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCL3P19876 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.21□□□□□ -0.13
CXCL3P19876 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms