Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 AC078925.2-201ENST00000624013 1973 ntBASIC18.36■□□□□ 0.53
CCDC172P0C7W6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 NUS1P2-201ENST00000417358 873 ntBASIC18.35■□□□□ 0.53
CCDC172P0C7W6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC172P0C7W6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 LINC00982-205ENST00000420957 435 ntBASIC18.34■□□□□ 0.53
CCDC172P0C7W6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 PRYP5-201ENST00000451909 266 ntBASIC18.34■□□□□ 0.53
CCDC172P0C7W6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 AC092119.3-201ENST00000612618 583 ntBASIC18.34■□□□□ 0.53
CCDC172P0C7W6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC172P0C7W6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC172P0C7W6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC172P0C7W6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC172P0C7W6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC172P0C7W6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC172P0C7W6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC172P0C7W6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC172P0C7W6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms