Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.69■□□□□ 0.26
EDF1O60869 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
EDF1O60869 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.69■□□□□ 0.26
EDF1O60869 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.69■□□□□ 0.26
EDF1O60869 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
EDF1O60869 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
EDF1O60869 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.69■□□□□ 0.26
EDF1O60869 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
EDF1O60869 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.69■□□□□ 0.26
EDF1O60869 AC073912.3-201ENST00000624414 853 ntBASIC16.69■□□□□ 0.26
EDF1O60869 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
EDF1O60869 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.69■□□□□ 0.26
EDF1O60869 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.69■□□□□ 0.26
EDF1O60869 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.69■□□□□ 0.26
EDF1O60869 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EDF1O60869 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EDF1O60869 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EDF1O60869 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
EDF1O60869 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EDF1O60869 GGT4P-201ENST00000623672 1708 ntBASIC16.68■□□□□ 0.26
EDF1O60869 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.68■□□□□ 0.26
EDF1O60869 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.68■□□□□ 0.26
EDF1O60869 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EDF1O60869 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
EDF1O60869 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EDF1O60869 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EDF1O60869 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EDF1O60869 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.68■□□□□ 0.26
EDF1O60869 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.68■□□□□ 0.26
EDF1O60869 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EDF1O60869 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.68■□□□□ 0.26
EDF1O60869 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
EDF1O60869 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.68■□□□□ 0.26
EDF1O60869 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.68■□□□□ 0.26
EDF1O60869 AL138966.2-201ENST00000621997 464 ntBASIC16.68■□□□□ 0.26
EDF1O60869 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
EDF1O60869 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.68■□□□□ 0.26
EDF1O60869 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EDF1O60869 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.68■□□□□ 0.26
EDF1O60869 AP005117.1-202ENST00000581724 1908 ntBASIC16.68■□□□□ 0.26
EDF1O60869 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
EDF1O60869 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.68■□□□□ 0.26
EDF1O60869 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EDF1O60869 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
EDF1O60869 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
EDF1O60869 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
EDF1O60869 AC013268.4-201ENST00000637413 2228 ntBASIC16.68■□□□□ 0.26
EDF1O60869 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.67■□□□□ 0.26
EDF1O60869 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.67■□□□□ 0.26
EDF1O60869 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 GGT3P-204ENST00000453783 1664 ntBASIC16.67■□□□□ 0.26
EDF1O60869 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.67■□□□□ 0.26
EDF1O60869 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.67■□□□□ 0.26
EDF1O60869 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.67■□□□□ 0.26
EDF1O60869 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.67■□□□□ 0.26
EDF1O60869 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.67■□□□□ 0.26
EDF1O60869 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.67■□□□□ 0.26
EDF1O60869 AL390719.2-201ENST00000606993 987 ntBASIC16.67■□□□□ 0.26
EDF1O60869 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.67■□□□□ 0.26
EDF1O60869 AL139011.1-202ENST00000642063 584 ntBASIC16.67■□□□□ 0.26
EDF1O60869 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EDF1O60869 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.67■□□□□ 0.26
EDF1O60869 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms