Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AL732292.2-201ENST00000609649 430 ntBASIC16.58■□□□□ 0.24
PEX1O43933 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.58■□□□□ 0.24
PEX1O43933 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.58■□□□□ 0.24
PEX1O43933 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.58■□□□□ 0.24
PEX1O43933 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.58■□□□□ 0.24
PEX1O43933 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 AC104640.1-201ENST00000562617 2109 ntBASIC16.58■□□□□ 0.24
PEX1O43933 AC024909.3-201ENST00000611513 2257 ntBASIC16.58■□□□□ 0.24
PEX1O43933 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.58■□□□□ 0.24
PEX1O43933 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
PEX1O43933 PAUPAR-201ENST00000630360 2965 ntBASIC16.58■□□□□ 0.24
PEX1O43933 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PEX1O43933 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.57■□□□□ 0.24
PEX1O43933 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.57■□□□□ 0.24
PEX1O43933 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PEX1O43933 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.57■□□□□ 0.24
PEX1O43933 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.57■□□□□ 0.24
PEX1O43933 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.57■□□□□ 0.24
PEX1O43933 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PEX1O43933 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 AC004870.1-201ENST00000315132 882 ntBASIC16.57■□□□□ 0.24
PEX1O43933 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
PEX1O43933 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.57■□□□□ 0.24
PEX1O43933 TSPY12P-201ENST00000421279 868 ntBASIC16.57■□□□□ 0.24
PEX1O43933 AL845331.1-201ENST00000424978 1190 ntBASIC16.57■□□□□ 0.24
PEX1O43933 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.57■□□□□ 0.24
PEX1O43933 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.57■□□□□ 0.24
PEX1O43933 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.57■□□□□ 0.24
PEX1O43933 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.57■□□□□ 0.24
PEX1O43933 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.57■□□□□ 0.24
PEX1O43933 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.57■□□□□ 0.24
PEX1O43933 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PEX1O43933 AC138894.3-201ENST00000603787 634 ntBASIC16.57■□□□□ 0.24
PEX1O43933 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.57■□□□□ 0.24
PEX1O43933 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PEX1O43933 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PEX1O43933 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PEX1O43933 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.57■□□□□ 0.24
PEX1O43933 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PEX1O43933 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PEX1O43933 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.57■□□□□ 0.24
PEX1O43933 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PEX1O43933 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PEX1O43933 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PEX1O43933 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.56■□□□□ 0.24
PEX1O43933 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PEX1O43933 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PEX1O43933 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PEX1O43933 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PEX1O43933 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PEX1O43933 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PEX1O43933 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
PEX1O43933 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PEX1O43933 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PEX1O43933 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PEX1O43933 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.56■□□□□ 0.24
PEX1O43933 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PEX1O43933 IGHV3-47-201ENST00000425060 335 ntBASIC16.56■□□□□ 0.24
PEX1O43933 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.56■□□□□ 0.24
PEX1O43933 KRT18P31-201ENST00000506277 1292 ntBASIC16.56■□□□□ 0.24
PEX1O43933 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PEX1O43933 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PEX1O43933 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.56■□□□□ 0.24
PEX1O43933 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.56■□□□□ 0.24
PEX1O43933 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PEX1O43933 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PEX1O43933 IFNL4P1-201ENST00000607083 540 ntBASIC16.56■□□□□ 0.24
PEX1O43933 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms