Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LRCOL1A6NCL2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LRCOL1A6NCL2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LRCOL1A6NCL2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LRCOL1A6NCL2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
LRCOL1A6NCL2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
LRCOL1A6NCL2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.4□□□□□ -0.59
LRCOL1A6NCL2 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
LRCOL1A6NCL2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC11.4□□□□□ -0.59
LRCOL1A6NCL2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
LRCOL1A6NCL2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LRCOL1A6NCL2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 AL391005.1-201ENST00000623953 2435 ntBASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 AL590787.1-201ENST00000568856 1315 ntBASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 CRYGEP-201ENST00000412192 528 ntBASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 BX842568.4-201ENST00000421222 227 ntBASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 PRSS29P-201ENST00000440800 595 ntBASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 AC040169.1-201ENST00000565382 521 ntBASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 AC004790.2-201ENST00000623588 572 ntBASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 AC133963.1-201ENST00000504166 1679 ntBASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 AC008764.6-201ENST00000595909 2069 ntBASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC11.39□□□□□ -0.59
LRCOL1A6NCL2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 AL355312.1-201ENST00000407115 2176 ntBASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 LYSMD4-203ENST00000378904 2122 ntBASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 VN2R19P-201ENST00000442399 1052 ntBASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 AC092865.5-201ENST00000545435 363 ntBASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.38□□□□□ -0.59
LRCOL1A6NCL2 GGTLC5P-201ENST00000617623 998 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms