Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CCDC144AA2RUR9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC24.1■■□□□ 1.45
CCDC144AA2RUR9 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC144AA2RUR9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CCDC144AA2RUR9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC24.1■■□□□ 1.45
CCDC144AA2RUR9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC144AA2RUR9 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC24.1■■□□□ 1.45
CCDC144AA2RUR9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC24.1■■□□□ 1.45
CCDC144AA2RUR9 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC144AA2RUR9 RARRES2P9-201ENST00000565168 469 ntBASIC24.1■■□□□ 1.45
CCDC144AA2RUR9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC24.1■■□□□ 1.45
CCDC144AA2RUR9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC24.1■■□□□ 1.45
CCDC144AA2RUR9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC24.1■■□□□ 1.45
CCDC144AA2RUR9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 FO538757.1-201ENST00000623083 1397 ntBASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 AC073439.1-201ENST00000624121 1774 ntBASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
CCDC144AA2RUR9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC24.08■■□□□ 1.45
CCDC144AA2RUR9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC144AA2RUR9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC144AA2RUR9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC144AA2RUR9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
CCDC144AA2RUR9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC144AA2RUR9 KRT8P39-201ENST00000396270 1433 ntBASIC24.08■■□□□ 1.45
CCDC144AA2RUR9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC24.08■■□□□ 1.45
CCDC144AA2RUR9 NAA60-208ENST00000570819 833 ntTSL 2 BASIC24.08■■□□□ 1.44
CCDC144AA2RUR9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC24.08■■□□□ 1.44
CCDC144AA2RUR9 AL139011.1-202ENST00000642063 584 ntBASIC24.08■■□□□ 1.44
CCDC144AA2RUR9 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
CCDC144AA2RUR9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CCDC144AA2RUR9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC24.08■■□□□ 1.44
CCDC144AA2RUR9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
CCDC144AA2RUR9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
CCDC144AA2RUR9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 PC-204ENST00000524491 1714 ntTSL 2 BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144AA2RUR9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 WBP2-203ENST00000433525 928 ntTSL 2 BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 AC069120.2-201ENST00000524091 540 ntBASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 AL390754.1-201ENST00000619088 582 ntBASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144AA2RUR9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms