Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.41■□□□□ 0.54
CCDC66A2RUB6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.41■□□□□ 0.54
CCDC66A2RUB6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 AL359075.1-203ENST00000462729 1002 ntBASIC18.41■□□□□ 0.54
CCDC66A2RUB6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 FLJ16779-201ENST00000612722 7638 ntBASIC18.41■□□□□ 0.54
CCDC66A2RUB6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 AC005332.3-201ENST00000589904 676 ntBASIC18.4■□□□□ 0.54
CCDC66A2RUB6 AL390719.2-201ENST00000606993 987 ntBASIC18.4■□□□□ 0.54
CCDC66A2RUB6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC66A2RUB6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.39■□□□□ 0.54
CCDC66A2RUB6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.39■□□□□ 0.54
CCDC66A2RUB6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CCDC66A2RUB6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.39■□□□□ 0.54
CCDC66A2RUB6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CCDC66A2RUB6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.39■□□□□ 0.54
CCDC66A2RUB6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC66A2RUB6 AC144831.1-201ENST00000573312 2656 ntBASIC18.39■□□□□ 0.54
CCDC66A2RUB6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 AC092068.3-201ENST00000587894 2016 ntBASIC18.39■□□□□ 0.53
CCDC66A2RUB6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 COX5BP2-201ENST00000392354 334 ntBASIC18.39■□□□□ 0.53
CCDC66A2RUB6 AC005521.1-201ENST00000393351 872 ntBASIC18.39■□□□□ 0.53
CCDC66A2RUB6 RNF152P1-201ENST00000397754 604 ntBASIC18.39■□□□□ 0.53
CCDC66A2RUB6 TSPY5P-201ENST00000426936 936 ntBASIC18.39■□□□□ 0.53
CCDC66A2RUB6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 FAM210CP-201ENST00000445714 574 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms