Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 MTHFR-217ENST00000641820 1569 ntBASIC15.35■□□□□ 0.05
TMEM129A0AVI4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM129A0AVI4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 AC103702.1-201ENST00000548801 2630 ntBASIC15.34■□□□□ 0.05
TMEM129A0AVI4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 AC092364.2-201ENST00000596710 2692 ntBASIC15.34■□□□□ 0.05
TMEM129A0AVI4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 EMBP1-201ENST00000458200 901 ntBASIC15.34■□□□□ 0.05
TMEM129A0AVI4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 AC125634.1-201ENST00000438758 1403 ntBASIC15.34■□□□□ 0.05
TMEM129A0AVI4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM129A0AVI4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM129A0AVI4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM129A0AVI4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM129A0AVI4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 AC109462.3-201ENST00000573934 613 ntBASIC15.33■□□□□ 0.04
TMEM129A0AVI4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 AL138831.2-201ENST00000606564 490 ntBASIC15.33■□□□□ 0.04
TMEM129A0AVI4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TMEM129A0AVI4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms