Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGC4Q9Y5F7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGC4Q9Y5F7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGC4Q9Y5F7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
PCDHGC4Q9Y5F7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
PCDHGC4Q9Y5F7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
PCDHGC4Q9Y5F7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGC4Q9Y5F7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHGC4Q9Y5F7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHGC4Q9Y5F7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHGC4Q9Y5F7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 AC096734.2-201ENST00000562054 433 ntBASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC4Q9Y5F7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 OR6D1P-203ENST00000641209 4860 ntBASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGC4Q9Y5F7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 AC106886.4-201ENST00000623557 2502 ntBASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 RHOQP3-201ENST00000437982 621 ntBASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 AL513480.1-201ENST00000451731 511 ntBASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 AC004877.2-201ENST00000623941 599 ntBASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGC4Q9Y5F7 RNF216P1-203ENST00000404404 2427 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms