Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 AC006538.1-201ENST00000567905 1585 ntBASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.51
UBE2D4Q9Y2X8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
UBE2D4Q9Y2X8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
UBE2D4Q9Y2X8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC11.83□□□□□ -0.51
UBE2D4Q9Y2X8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
UBE2D4Q9Y2X8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 ANKRD26P3-201ENST00000454044 2748 ntBASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 KLF4P1-201ENST00000412782 1185 ntBASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 KRT18P38-201ENST00000449496 1282 ntBASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 TMEM191A-211ENST00000637163 1067 ntBASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC11.83□□□□□ -0.52
UBE2D4Q9Y2X8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 AC132938.5-201ENST00000624980 1813 ntBASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 AC087499.1-201ENST00000418141 1075 ntBASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 AC117947.1-201ENST00000427448 529 ntBASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 RN7SL606P-201ENST00000472779 293 ntBASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 AL592071.1-201ENST00000611956 408 ntBASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms