Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 Z83851.2-201ENST00000609564 659 ntBASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 AC084018.2-201ENST00000613093 2607 ntBASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.83■□□□□ 0.45
PCDHGC3Q9UN70 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGC3Q9UN70 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PCDHGC3Q9UN70 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGC3Q9UN70 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
PCDHGC3Q9UN70 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGC3Q9UN70 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGC3Q9UN70 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGC3Q9UN70 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 HCG4B-203ENST00000450128 991 ntBASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 CXCL1P1-201ENST00000502804 216 ntBASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 AC087641.1-201ENST00000557561 1021 ntBASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 CYP2A7P1-201ENST00000595391 815 ntBASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.83■□□□□ 0.44
PCDHGC3Q9UN70 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 KRT8P39-201ENST00000396270 1433 ntBASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 CRYGEP-201ENST00000412192 528 ntBASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 IGLL3P-201ENST00000412472 434 ntBASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 AP001350.2-201ENST00000625104 1094 ntBASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 AC092171.3-201ENST00000610122 2651 ntBASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC3Q9UN70 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGC3Q9UN70 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC3Q9UN70 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGC3Q9UN70 IL9RP2-201ENST00000423948 1312 ntBASIC17.81■□□□□ 0.44
PCDHGC3Q9UN70 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC3Q9UN70 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC3Q9UN70 PCDHA14-201ENST00000506751 2298 ntBASIC17.81■□□□□ 0.44
PCDHGC3Q9UN70 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGC3Q9UN70 AC034105.1-201ENST00000563488 319 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms