Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 PEG3-209ENST00000599577 5052 ntAPPRIS P1 TSL 1 (best)20.23■□□□□ 0.837e-8■□□□□ 8.4
DROSHAQ9NRR4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.79■□□□□ 0.67e-8■□□□□ 8.4
DROSHAQ9NRR4 ZIM2-203ENST00000595671 2054 ntTSL 1 (best)18.66■□□□□ 0.587e-8■□□□□ 8.4
DROSHAQ9NRR4 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC16.39■□□□□ 0.217e-8■□□□□ 8.4
DROSHAQ9NRR4 PEG3-207ENST00000599534 5115 ntAPPRIS P1 TSL 1 (best)15.61■□□□□ 0.097e-8■□□□□ 8.4
DROSHAQ9NRR4 ZIM2-205ENST00000597281 2037 ntTSL 1 (best)14.33□□□□□ -0.127e-8■□□□□ 8.4
DROSHAQ9NRR4 PEG3-210ENST00000600833 1558 ntTSL 1 (best)14.22□□□□□ -0.137e-8■□□□□ 8.4
DROSHAQ9NRR4 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.337e-8■□□□□ 8.4
DROSHAQ9NRR4 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.577e-8■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.585e-7■□□□□ 8.4
DROSHAQ9NRR4 SLC25A1-203ENST00000461267 804 ntTSL 336.71■■■■□ 3.475e-7■□□□□ 8.4
DROSHAQ9NRR4 FUS-212ENST00000569760 639 ntTSL 236.21■■■■□ 3.392e-18■□□□□ 8.4
DROSHAQ9NRR4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC36.2■■■■□ 3.395e-7■□□□□ 8.4
DROSHAQ9NRR4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.175e-7■□□□□ 8.4
DROSHAQ9NRR4 SLC25A1-205ENST00000470922 1598 ntTSL 234.43■■■■□ 3.15e-7■□□□□ 8.4
DROSHAQ9NRR4 FUS-204ENST00000483853 778 ntTSL 233.17■■■□□ 2.92e-18■□□□□ 8.4
DROSHAQ9NRR4 RBPJ-216ENST00000509158 555 ntTSL 231.57■■■□□ 2.645e-7■□□□□ 8.4
DROSHAQ9NRR4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC31.3■■■□□ 2.65e-7■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-204ENST00000571721 813 ntTSL 529.41■■■□□ 2.35e-7■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.175e-7■□□□□ 8.4
DROSHAQ9NRR4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC27.42■■□□□ 1.985e-7■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-209ENST00000575659 742 ntTSL 326.81■■□□□ 1.885e-7■□□□□ 8.4
DROSHAQ9NRR4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.715e-7■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.555e-7■□□□□ 8.4
DROSHAQ9NRR4 RBPJ-223ENST00000512671 795 ntTSL 224.25■■□□□ 1.475e-7■□□□□ 8.4
DROSHAQ9NRR4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.135e-7■□□□□ 8.4
DROSHAQ9NRR4 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC21.43■■□□□ 1.025e-7■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-205ENST00000572105 1168 ntTSL 521.36■■□□□ 1.015e-7■□□□□ 8.4
DROSHAQ9NRR4 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC20.91■□□□□ 0.945e-7■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-203ENST00000571691 761 ntTSL 320.81■□□□□ 0.925e-7■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-215ENST00000576917 1958 ntTSL 520.41■□□□□ 0.865e-7■□□□□ 8.4
DROSHAQ9NRR4 CDC45-212ENST00000493724 469 ntTSL 220.19■□□□□ 0.825e-7■□□□□ 8.4
DROSHAQ9NRR4 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.825e-7■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-202ENST00000570382 471 ntTSL 419.99■□□□□ 0.795e-7■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.785e-7■□□□□ 8.4
DROSHAQ9NRR4 RBPJ-213ENST00000506956 566 ntTSL 419.83■□□□□ 0.775e-7■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-213ENST00000576214 1024 ntTSL 519.81■□□□□ 0.765e-7■□□□□ 8.4
DROSHAQ9NRR4 TRA2B-206ENST00000456380 1697 ntTSL 519.71■□□□□ 0.755e-7■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-211ENST00000575994 856 ntTSL 319.66■□□□□ 0.745e-7■□□□□ 8.4
DROSHAQ9NRR4 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC19.44■□□□□ 0.75e-7■□□□□ 8.4
DROSHAQ9NRR4 TRA2B-208ENST00000465245 634 ntTSL 319.43■□□□□ 0.75e-7■□□□□ 8.4
DROSHAQ9NRR4 TMEM259-204ENST00000586285 626 ntTSL 319.25■□□□□ 0.675e-7■□□□□ 8.4
DROSHAQ9NRR4 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC19.17■□□□□ 0.665e-7■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.645e-7■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-214ENST00000576544 1720 ntTSL 518.85■□□□□ 0.615e-7■□□□□ 8.4
DROSHAQ9NRR4 TRA2B-212ENST00000480461 538 ntTSL 1 (best)18.7■□□□□ 0.585e-7■□□□□ 8.4
DROSHAQ9NRR4 TRA2B-213ENST00000485530 839 ntTSL 218.7■□□□□ 0.585e-7■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-212ENST00000576209 1698 ntTSL 1 (best)18.37■□□□□ 0.535e-7■□□□□ 8.4
DROSHAQ9NRR4 ACTG1-207ENST00000574671 1678 ntTSL 1 (best)18.27■□□□□ 0.515e-7■□□□□ 8.4
DROSHAQ9NRR4 CDC45-203ENST00000407835 2090 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.415e-7■□□□□ 8.4
DROSHAQ9NRR4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.335e-7■□□□□ 8.4
DROSHAQ9NRR4 RBPJ-224ENST00000513182 537 ntTSL 412.81□□□□□ -0.365e-7■□□□□ 8.4
DROSHAQ9NRR4 RBPJ-222ENST00000512351 609 ntTSL 411.35□□□□□ -0.595e-7■□□□□ 8.4
DROSHAQ9NRR4 RBPJ-225ENST00000514380 1519 ntTSL 29.91□□□□□ -0.825e-7■□□□□ 8.4
DROSHAQ9NRR4 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC9.62□□□□□ -0.875e-7■□□□□ 8.4
DROSHAQ9NRR4 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.895e-7■□□□□ 8.4
DROSHAQ9NRR4 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC9.25□□□□□ -0.935e-7■□□□□ 8.4
DROSHAQ9NRR4 RBPJ-229ENST00000514807 340 ntTSL 33.84□□□□□ -1.795e-7■□□□□ 8.4
DROSHAQ9NRR4 RBPJ-218ENST00000510778 716 ntTSL 53.2□□□□□ -1.95e-7■□□□□ 8.4
DROSHAQ9NRR4 RBPJ-219ENST00000511401 577 ntTSL 52.71□□□□□ -1.985e-7■□□□□ 8.4
DROSHAQ9NRR4 RBPJ-230ENST00000515023 388 ntTSL 51.94□□□□□ -2.15e-7■□□□□ 8.4
DROSHAQ9NRR4 UBAC1-202ENST00000465873 882 ntTSL 224.97■■□□□ 1.592e-21■□□□□ 8.4
DROSHAQ9NRR4 UBAC1-206ENST00000489050 864 ntTSL 315.79■□□□□ 0.122e-21■□□□□ 8.4
DROSHAQ9NRR4 DPP7-210ENST00000483783 958 ntTSL 233.86■■■■□ 3.015e-9■□□□□ 8.4
DROSHAQ9NRR4 DPP7-202ENST00000460830 639 ntTSL 230.57■■■□□ 2.485e-9■□□□□ 8.4
DROSHAQ9NRR4 DPP7-203ENST00000463619 775 ntTSL 322■■□□□ 1.115e-9■□□□□ 8.4
DROSHAQ9NRR4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.761e-24■□□□□ 8.4
DROSHAQ9NRR4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.551e-24■□□□□ 8.4
DROSHAQ9NRR4 BBC3-206ENST00000601438 1747 nt26.85■■□□□ 1.899e-16■□□□□ 8.3
DROSHAQ9NRR4 HNRNPA2B1-203ENST00000360787 1724 ntTSL 521.95■■□□□ 1.12e-23■□□□□ 8.3
DROSHAQ9NRR4 HNRNPA2B1-206ENST00000490912 5328 ntTSL 218.33■□□□□ 0.522e-23■□□□□ 8.3
DROSHAQ9NRR4 HNRNPA2B1-202ENST00000356674 1711 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.482e-23■□□□□ 8.3
DROSHAQ9NRR4 HNRNPA2B1-204ENST00000463181 6284 ntTSL 216.25■□□□□ 0.192e-23■□□□□ 8.3
DROSHAQ9NRR4 HNRNPA2B1-208ENST00000618183 3539 ntTSL 5 BASIC15.08■□□□□ 02e-23■□□□□ 8.3
DROSHAQ9NRR4 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.712e-23■□□□□ 8.3
DROSHAQ9NRR4 EPB41L2-231ENST00000534166 572 ntTSL 39.44□□□□□ -0.97e-22■□□□□ 8.3
DROSHAQ9NRR4 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC7.15□□□□□ -1.263e-7■□□□□ 8.3
DROSHAQ9NRR4 HPN-207ENST00000599363 1828 ntTSL 531.46■■■□□ 2.634e-6■□□□□ 8.3
DROSHAQ9NRR4 HPN-208ENST00000600390 564 ntTSL 429.7■■■□□ 2.354e-6■□□□□ 8.3
DROSHAQ9NRR4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC26.93■■□□□ 1.94e-6■□□□□ 8.3
DROSHAQ9NRR4 EML4-205ENST00000409040 962 ntTSL 1 (best)26.82■■□□□ 1.881e-7■□□□□ 8.3
DROSHAQ9NRR4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.774e-6■□□□□ 8.3
DROSHAQ9NRR4 SPRED2-207ENST00000452315 1365 ntTSL 1 (best)25.57■■□□□ 1.684e-6■□□□□ 8.3
DROSHAQ9NRR4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.684e-6■□□□□ 8.3
DROSHAQ9NRR4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.484e-6■□□□□ 8.3
DROSHAQ9NRR4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC22.06■■□□□ 1.124e-6■□□□□ 8.3
DROSHAQ9NRR4 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.974e-6■□□□□ 8.3
DROSHAQ9NRR4 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.434e-6■□□□□ 8.3
DROSHAQ9NRR4 SPRED2-208ENST00000474228 876 ntTSL 316.29■□□□□ 0.24e-6■□□□□ 8.3
DROSHAQ9NRR4 SMARCA1-201ENST00000371121 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.184e-6■□□□□ 8.3
DROSHAQ9NRR4 SPRED2-203ENST00000426832 498 ntTSL 315.08■□□□□ 04e-6■□□□□ 8.3
DROSHAQ9NRR4 SMARCA1-205ENST00000617310 4291 ntTSL 212.45□□□□□ -0.424e-6■□□□□ 8.3
DROSHAQ9NRR4 ERICH1-209ENST00000523415 3630 ntTSL 211.72□□□□□ -0.534e-6■□□□□ 8.3
DROSHAQ9NRR4 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.554e-6■□□□□ 8.3
DROSHAQ9NRR4 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.564e-6■□□□□ 8.3
DROSHAQ9NRR4 SPRED2-204ENST00000427238 467 ntTSL 35.5□□□□□ -1.534e-6■□□□□ 8.3
DROSHAQ9NRR4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC37.91■■■■□ 3.662e-7■□□□□ 8.2
DROSHAQ9NRR4 TRA2A-204ENST00000474586 868 ntTSL 332.95■■■□□ 2.862e-7■□□□□ 8.2
DROSHAQ9NRR4 RPL27A-205ENST00000529227 607 ntTSL 1 (best)27.07■■□□□ 1.922e-7■□□□□ 8.2
DROSHAQ9NRR4 GDI1-211ENST00000481304 1014 ntTSL 1 (best)25.71■■□□□ 1.713e-16■□□□□ 8.2
Retrieved 100 of 16,331 protein–RNA pairs in 308.8 ms