RNA–Protein interactions for RNA: ENST00000427238.1

SPRED2-204, Transcript of sprouty related EVH1 domain containing 2, humanhuman

TSL 3

Gene SPRED2, Length 467 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED2-204ENST00000427238 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
SPRED2-204ENST00000427238 CHIC1Q5VXU3 224 aa22.7■■□□□ 1.22
SPRED2-204ENST00000427238 SENP3Q9H4L4 574 aaPredicted RBP20.43■□□□□ 0.86
SPRED2-204ENST00000427238 PHF23Q9BUL5 403 aaPredicted RBP20.17■□□□□ 0.82
SPRED2-204ENST00000427238 FOXD1Q16676 465 aa19.03■□□□□ 0.64
SPRED2-204ENST00000427238 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
SPRED2-204ENST00000427238 MSH5O43196 834 aa17.84■□□□□ 0.45
SPRED2-204ENST00000427238 PIAS4Q8N2W9 510 aaPredicted RBP17.82■□□□□ 0.44
SPRED2-204ENST00000427238 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
SPRED2-204ENST00000427238 ADRA2BP18089 450 aa17.75■□□□□ 0.43
SPRED2-204ENST00000427238 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
SPRED2-204ENST00000427238 MAPK8IP2Q13387 824 aaPredicted RBP16.3■□□□□ 0.2
SPRED2-204ENST00000427238 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.2
SPRED2-204ENST00000427238 DMRT2Q9Y5R5 561 aa16.18■□□□□ 0.18
SPRED2-204ENST00000427238 PPP4R3CPQ6ZMV5 832 aa15.92■□□□□ 0.14
SPRED2-204ENST00000427238 CNKSR2Q8WXI2 1034 aa15.62■□□□□ 0.09
SPRED2-204ENST00000427238 DCAF8L1A6NGE4 600 aa15.61■□□□□ 0.09
SPRED2-204ENST00000427238 HOXD11P31277 338 aaPredicted RBP15.57■□□□□ 0.08
SPRED2-204ENST00000427238 RNF216Q9NWF9 866 aaPredicted RBP15.47■□□□□ 0.07
SPRED2-204ENST00000427238 CACNB1Q02641 598 aaPredicted RBP15.34■□□□□ 0.05
SPRED2-204ENST00000427238 NCBP3Q53F19 620 aaKnown RBP15.34■□□□□ 0.05
SPRED2-204ENST00000427238 RNF39Q9H2S5 420 aa15.19■□□□□ 0.02
SPRED2-204ENST00000427238 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
SPRED2-204ENST00000427238 DNAJC5BQ9UF47 199 aa15.02■□□□□ -0
SPRED2-204ENST00000427238 C1QBPQ07021 282 aaKnown RBP15□□□□□ -0.01
SPRED2-204ENST00000427238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.91□□□□□ -0.026e-13■■□□□ 13.1
SPRED2-204ENST00000427238 KCNA4P22459 653 aa14.77□□□□□ -0.05
SPRED2-204ENST00000427238 U3KPZ7 1027 aaPredicted RBP14.53□□□□□ -0.08
SPRED2-204ENST00000427238 SLC4A2P04920 1241 aa14.38□□□□□ -0.11
SPRED2-204ENST00000427238 CAPN15O75808 1086 aa14.37□□□□□ -0.11
SPRED2-204ENST00000427238 SPINK5Q9NQ38 1064 aaPredicted RBP14.35□□□□□ -0.11
SPRED2-204ENST00000427238 DSG3P32926 999 aa14.24□□□□□ -0.13
SPRED2-204ENST00000427238 APLP2Q06481 763 aa14.19□□□□□ -0.14
SPRED2-204ENST00000427238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.17□□□□□ -0.14
SPRED2-204ENST00000427238 HNRNPUL2Q1KMD3 747 aaKnown RBP14.17□□□□□ -0.14
SPRED2-204ENST00000427238 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
SPRED2-204ENST00000427238 SAMD1Q6SPF0 538 aaPredicted RBP14.08□□□□□ -0.16
SPRED2-204ENST00000427238 ZNF219Q9P2Y4 722 aaPredicted RBP14.07□□□□□ -0.16
SPRED2-204ENST00000427238 ABCB7O75027 752 aa14.02□□□□□ -0.17
SPRED2-204ENST00000427238 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
SPRED2-204ENST00000427238 MYCNP04198 464 aaPredicted RBP13.95□□□□□ -0.18
SPRED2-204ENST00000427238 FOXD4L1Q9NU39 408 aa13.8□□□□□ -0.2
SPRED2-204ENST00000427238 POLA2Q14181 598 aa13.74□□□□□ -0.21
SPRED2-204ENST00000427238 POTEHQ6S545 545 aa13.66□□□□□ -0.22
SPRED2-204ENST00000427238 RBM42Q9BTD8 480 aaKnown RBP13.61□□□□□ -0.23
SPRED2-204ENST00000427238 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
SPRED2-204ENST00000427238 ZBTB22O15209 634 aa13.55□□□□□ -0.24
SPRED2-204ENST00000427238 ZBTB12Q9Y330 459 aaPredicted RBP13.45□□□□□ -0.26
SPRED2-204ENST00000427238 ATXN8OSP0DMR3 200 aa13.37□□□□□ -0.27
SPRED2-204ENST00000427238 CHRDL2Q6WN34 429 aa13.31□□□□□ -0.28
SPRED2-204ENST00000427238 OSCARQ8IYS5 282 aa13.28□□□□□ -0.28
SPRED2-204ENST00000427238 AKT1S1Q96B36 256 aa13.28□□□□□ -0.28
SPRED2-204ENST00000427238 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
SPRED2-204ENST00000427238 FBLN2P98095 1184 aa13.14□□□□□ -0.31
SPRED2-204ENST00000427238 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
SPRED2-204ENST00000427238 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
SPRED2-204ENST00000427238 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
SPRED2-204ENST00000427238 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
SPRED2-204ENST00000427238 PIP4P2Q8N4L2 257 aa12.98□□□□□ -0.33
SPRED2-204ENST00000427238 MKRN4PQ13434 485 aaPredicted RBP12.97□□□□□ -0.33
SPRED2-204ENST00000427238 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
SPRED2-204ENST00000427238 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
SPRED2-204ENST00000427238 FXR2P51116 673 aaKnown RBP eCLIP12.88□□□□□ -0.35
SPRED2-204ENST00000427238 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
SPRED2-204ENST00000427238 SPDYE1Q8NFV5 336 aaPredicted RBP12.82□□□□□ -0.36
SPRED2-204ENST00000427238 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
SPRED2-204ENST00000427238 SSUH2Q9Y2M2 353 aa12.81□□□□□ -0.36
SPRED2-204ENST00000427238 HAX1O00165 279 aa12.8□□□□□ -0.36
SPRED2-204ENST00000427238 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
SPRED2-204ENST00000427238 PRKAR2AP13861 404 aaKnown RBP12.7□□□□□ -0.38
SPRED2-204ENST00000427238 PABPN1Q86U42 306 aaKnown RBP eCLIP12.7□□□□□ -0.38
SPRED2-204ENST00000427238 PRR29P0C7W0 189 aa12.6□□□□□ -0.39
SPRED2-204ENST00000427238 EVX2Q03828 476 aa12.58□□□□□ -0.4
SPRED2-204ENST00000427238 CHADLQ6NUI6 762 aa12.55□□□□□ -0.4
SPRED2-204ENST00000427238 C19orf67A6NJJ6 358 aa12.48□□□□□ -0.41
SPRED2-204ENST00000427238 SPDYE4A6NLX3 237 aa12.41□□□□□ -0.42
SPRED2-204ENST00000427238 FARP1Q9Y4F1 1045 aaPredicted RBP12.36□□□□□ -0.43
SPRED2-204ENST00000427238 STAG3Q9UJ98 1225 aa12.35□□□□□ -0.43
SPRED2-204ENST00000427238 GABBR2O75899 941 aa12.31□□□□□ -0.44
SPRED2-204ENST00000427238 CD44P16070 742 aaKnown RBP12.3□□□□□ -0.44
SPRED2-204ENST00000427238 CREBZFQ9NS37 354 aa12.23□□□□□ -0.45
SPRED2-204ENST00000427238 ZRANB1Q9UGI0 708 aa12.13□□□□□ -0.47
SPRED2-204ENST00000427238 CLCN6P51797 869 aa12.12□□□□□ -0.47
SPRED2-204ENST00000427238 ZNF579Q8NAF0 562 aaKnown RBP12.07□□□□□ -0.48
SPRED2-204ENST00000427238 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
SPRED2-204ENST00000427238 PAK3O75914 559 aaPredicted RBP12.05□□□□□ -0.48
SPRED2-204ENST00000427238 POTEIP0CG38 1075 aa12.02□□□□□ -0.49
SPRED2-204ENST00000427238 LHX8Q68G74 356 aa12.02□□□□□ -0.49
SPRED2-204ENST00000427238 PROM2Q8N271 834 aa12.02□□□□□ -0.49
SPRED2-204ENST00000427238 DCBLD2Q96PD2 775 aa12.02□□□□□ -0.49
SPRED2-204ENST00000427238 MNX1P50219 401 aaPredicted RBP12□□□□□ -0.49
SPRED2-204ENST00000427238 GALR2O43603 387 aaPredicted RBP11.94□□□□□ -0.5
SPRED2-204ENST00000427238 PHF12Q96QT6 1004 aa11.94□□□□□ -0.5
SPRED2-204ENST00000427238 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
SPRED2-204ENST00000427238 MIER1Q8N108 512 aa11.88□□□□□ -0.51
SPRED2-204ENST00000427238 TSPYL2Q9H2G4 693 aaPredicted RBP11.85□□□□□ -0.51
SPRED2-204ENST00000427238 FKBP8Q14318 412 aa11.78□□□□□ -0.52
SPRED2-204ENST00000427238 PLCD3Q8N3E9 789 aa11.78□□□□□ -0.52
SPRED2-204ENST00000427238 MS4A3Q96HJ5 214 aa11.77□□□□□ -0.53
SPRED2-204ENST00000427238 CCDC61Q9Y6R9 512 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms