Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
DDX1Q92499 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
DDX1Q92499 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX1Q92499 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX1Q92499 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX1Q92499 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX1Q92499 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.03■□□□□ 0.48
DDX1Q92499 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX1Q92499 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX1Q92499 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.03■□□□□ 0.48
DDX1Q92499 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX1Q92499 PCDHB19P-201ENST00000570871 2371 ntBASIC18.02■□□□□ 0.48
DDX1Q92499 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX1Q92499 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.02■□□□□ 0.48
DDX1Q92499 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
DDX1Q92499 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
DDX1Q92499 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX1Q92499 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX1Q92499 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DDX1Q92499 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.02■□□□□ 0.48
DDX1Q92499 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.02■□□□□ 0.48
DDX1Q92499 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.02■□□□□ 0.48
DDX1Q92499 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.02■□□□□ 0.48
DDX1Q92499 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX1Q92499 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
DDX1Q92499 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
DDX1Q92499 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
DDX1Q92499 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
DDX1Q92499 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX1Q92499 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
DDX1Q92499 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DDX1Q92499 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.02■□□□□ 0.47
DDX1Q92499 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
DDX1Q92499 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DDX1Q92499 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
DDX1Q92499 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DDX1Q92499 SNX33P1-201ENST00000592116 1762 ntBASIC18.02■□□□□ 0.47
DDX1Q92499 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DDX1Q92499 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
DDX1Q92499 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
DDX1Q92499 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX1Q92499 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
DDX1Q92499 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.01■□□□□ 0.47
DDX1Q92499 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX1Q92499 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.01■□□□□ 0.47
DDX1Q92499 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
DDX1Q92499 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
DDX1Q92499 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX1Q92499 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX1Q92499 AC104109.2-201ENST00000602919 1418 ntBASIC18.01■□□□□ 0.47
DDX1Q92499 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
DDX1Q92499 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
DDX1Q92499 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
DDX1Q92499 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX1Q92499 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.01■□□□□ 0.47
DDX1Q92499 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX1Q92499 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX1Q92499 YBX2P1-201ENST00000394192 760 ntBASIC18.01■□□□□ 0.47
DDX1Q92499 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.01■□□□□ 0.47
DDX1Q92499 AC112482.1-201ENST00000492080 688 ntBASIC18.01■□□□□ 0.47
DDX1Q92499 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.01■□□□□ 0.47
DDX1Q92499 AL049840.3-201ENST00000602669 611 ntBASIC18.01■□□□□ 0.47
DDX1Q92499 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.01■□□□□ 0.47
DDX1Q92499 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
DDX1Q92499 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX1Q92499 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
DDX1Q92499 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX1Q92499 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX1Q92499 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
DDX1Q92499 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX1Q92499 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX1Q92499 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX1Q92499 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX1Q92499 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX1Q92499 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX1Q92499 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.01■□□□□ 0.47
DDX1Q92499 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
DDX1Q92499 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX1Q92499 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18■□□□□ 0.47
DDX1Q92499 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18■□□□□ 0.47
DDX1Q92499 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX1Q92499 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX1Q92499 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18■□□□□ 0.47
DDX1Q92499 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18■□□□□ 0.47
DDX1Q92499 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18■□□□□ 0.47
DDX1Q92499 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX1Q92499 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18■□□□□ 0.47
DDX1Q92499 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX1Q92499 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18■□□□□ 0.47
DDX1Q92499 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
DDX1Q92499 NMU-202ENST00000505262 693 ntTSL 3 BASIC18■□□□□ 0.47
DDX1Q92499 AC136632.2-201ENST00000512891 861 ntBASIC18■□□□□ 0.47
DDX1Q92499 AC107918.2-201ENST00000530817 355 ntBASIC18■□□□□ 0.47
DDX1Q92499 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18■□□□□ 0.47
DDX1Q92499 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18■□□□□ 0.47
DDX1Q92499 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18■□□□□ 0.47
DDX1Q92499 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18■□□□□ 0.47
DDX1Q92499 MIR4492-201ENST00000581627 80 ntBASIC18■□□□□ 0.47
DDX1Q92499 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18■□□□□ 0.47
DDX1Q92499 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms