Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 AD000864.1-201ENST00000624076 2295 ntBASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 RPL13AP23-201ENST00000480739 586 ntBASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 AC107918.2-201ENST00000530817 355 ntBASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC148Q8NFR7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.52■□□□□ 0.71
CCDC148Q8NFR7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.52■□□□□ 0.71
CCDC148Q8NFR7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC148Q8NFR7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC148Q8NFR7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CCDC148Q8NFR7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC148Q8NFR7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC148Q8NFR7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC148Q8NFR7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 CRYGEP-201ENST00000412192 528 ntBASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 VN2R19P-201ENST00000442399 1052 ntBASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 AC034105.1-201ENST00000563488 319 ntBASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 OR7E47P-204ENST00000575924 449 ntBASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC148Q8NFR7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 ZNF259P1-201ENST00000407656 1365 ntBASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 TNRC18P3-201ENST00000441896 2691 ntBASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC148Q8NFR7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms