Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00311Q8N616 AL049840.3-201ENST00000602669 611 ntBASIC13.72□□□□□ -0.21
LINC00311Q8N616 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC00311Q8N616 AC004790.2-201ENST00000623588 572 ntBASIC13.72□□□□□ -0.21
LINC00311Q8N616 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00311Q8N616 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
LINC00311Q8N616 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00311Q8N616 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00311Q8N616 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 KRT8P39-201ENST00000396270 1433 ntBASIC13.72□□□□□ -0.21
LINC00311Q8N616 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LINC00311Q8N616 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00311Q8N616 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00311Q8N616 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00311Q8N616 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00311Q8N616 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00311Q8N616 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00311Q8N616 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 PMS2P1-201ENST00000431037 1228 ntBASIC13.71□□□□□ -0.21
LINC00311Q8N616 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00311Q8N616 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.71□□□□□ -0.21
LINC00311Q8N616 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00311Q8N616 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00311Q8N616 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00311Q8N616 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00311Q8N616 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00311Q8N616 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
LINC00311Q8N616 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
LINC00311Q8N616 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00311Q8N616 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00311Q8N616 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00311Q8N616 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00311Q8N616 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00311Q8N616 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00311Q8N616 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00311Q8N616 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00311Q8N616 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
LINC00311Q8N616 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00311Q8N616 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00311Q8N616 SNX33P1-201ENST00000592116 1762 ntBASIC13.71□□□□□ -0.22
LINC00311Q8N616 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00311Q8N616 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00311Q8N616 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LINC00311Q8N616 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00311Q8N616 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LINC00311Q8N616 SLC22A20-204ENST00000530038 1673 ntBASIC13.7□□□□□ -0.22
LINC00311Q8N616 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00311Q8N616 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00311Q8N616 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00311Q8N616 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00311Q8N616 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00311Q8N616 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00311Q8N616 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00311Q8N616 FAM185BP-201ENST00000443595 716 ntBASIC13.7□□□□□ -0.22
LINC00311Q8N616 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00311Q8N616 IGHV3-22-201ENST00000520721 359 ntBASIC13.7□□□□□ -0.22
LINC00311Q8N616 UNC93B6-202ENST00000528242 690 ntBASIC13.7□□□□□ -0.22
LINC00311Q8N616 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00311Q8N616 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00311Q8N616 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00311Q8N616 CYP2A7P1-201ENST00000595391 815 ntBASIC13.7□□□□□ -0.22
LINC00311Q8N616 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00311Q8N616 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00311Q8N616 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms