Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC93Q567U6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC93Q567U6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 U91328.1-201ENST00000437528 223 ntBASIC20.67■□□□□ 0.9
CCDC93Q567U6 HLA-V-204ENST00000476601 1289 ntBASIC20.67■□□□□ 0.9
CCDC93Q567U6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC93Q567U6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC93Q567U6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC93Q567U6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC93Q567U6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC93Q567U6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC93Q567U6 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.67■□□□□ 0.9
CCDC93Q567U6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC93Q567U6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC93Q567U6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC93Q567U6 LYSMD4-203ENST00000378904 2122 ntBASIC20.66■□□□□ 0.9
CCDC93Q567U6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC93Q567U6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCDC93Q567U6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC93Q567U6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC93Q567U6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC93Q567U6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC93Q567U6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC93Q567U6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCDC93Q567U6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC93Q567U6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC93Q567U6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC93Q567U6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC93Q567U6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC93Q567U6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC93Q567U6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC93Q567U6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC93Q567U6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC93Q567U6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC93Q567U6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCDC93Q567U6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC93Q567U6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC93Q567U6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC93Q567U6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC93Q567U6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC93Q567U6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC93Q567U6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC93Q567U6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC93Q567U6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC93Q567U6 AP3S2-216ENST00000617003 1561 ntBASIC20.65■□□□□ 0.9
CCDC93Q567U6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC93Q567U6 TOP3BP1-201ENST00000420768 1380 ntBASIC20.65■□□□□ 0.9
CCDC93Q567U6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC93Q567U6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC93Q567U6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC93Q567U6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC93Q567U6 AC105233.2-201ENST00000523697 349 ntBASIC20.65■□□□□ 0.9
CCDC93Q567U6 AF228730.5-201ENST00000530288 346 ntBASIC20.65■□□□□ 0.9
CCDC93Q567U6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC93Q567U6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC93Q567U6 TP53TG3HP-202ENST00000569755 579 ntBASIC20.65■□□□□ 0.9
CCDC93Q567U6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC93Q567U6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC93Q567U6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC93Q567U6 AP001350.2-201ENST00000625104 1094 ntBASIC20.65■□□□□ 0.9
CCDC93Q567U6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCDC93Q567U6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC93Q567U6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC93Q567U6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC93Q567U6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC93Q567U6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC93Q567U6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC93Q567U6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC93Q567U6 ABALON-201ENST00000629058 1903 ntBASIC20.65■□□□□ 0.9
CCDC93Q567U6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC93Q567U6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
CCDC93Q567U6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC93Q567U6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC93Q567U6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC93Q567U6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC93Q567U6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC93Q567U6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC93Q567U6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC93Q567U6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC93Q567U6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CCDC93Q567U6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC93Q567U6 GPR53P-205ENST00000457298 1084 ntBASIC20.64■□□□□ 0.89
CCDC93Q567U6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC93Q567U6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC93Q567U6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms